Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RPL7P9-201ENST00000468715 747 ntBASIC5.8□□□□□ -1.48
HIPK4Q8NE63 RN7SL369P-201ENST00000477138 299 ntBASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AC037198.2-201ENST00000478845 733 ntBASIC5.8□□□□□ -1.48
HIPK4Q8NE63 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AC134698.4-201ENST00000523451 826 ntBASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 VN1R88P-201ENST00000596787 292 ntBASIC5.8□□□□□ -1.48
HIPK4Q8NE63 MIR6774-201ENST00000614651 70 ntBASIC5.8□□□□□ -1.48
HIPK4Q8NE63 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AC079776.5-201ENST00000641920 211 ntBASIC5.8□□□□□ -1.48
HIPK4Q8NE63 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 FANCD2P2-201ENST00000437591 1400 ntBASIC5.8□□□□□ -1.48
HIPK4Q8NE63 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AC007342.5-201ENST00000571340 2142 ntBASIC5.8□□□□□ -1.48
HIPK4Q8NE63 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
HIPK4Q8NE63 AC003973.3-201ENST00000624863 2822 ntBASIC5.8□□□□□ -1.48
HIPK4Q8NE63 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC015689.2-201ENST00000528172 1738 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC109315.1-201ENST00000584143 1347 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AL672167.1-206ENST00000356293 943 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC092634.1-201ENST00000366505 199 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 VDAC2P1-201ENST00000399358 958 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 CENPIP1-201ENST00000425713 902 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 C8orf59P1-201ENST00000429930 303 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 FAM96AP1-201ENST00000430879 482 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AL590103.1-201ENST00000434488 307 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC099670.2-201ENST00000435130 321 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 CACYBPP1-201ENST00000438592 684 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 RPS19P6-201ENST00000441327 433 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 GAPDHP37-201ENST00000442317 968 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 CYCSP51-201ENST00000443545 318 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 RN7SL326P-201ENST00000477493 296 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC091965.2-201ENST00000512324 613 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC093816.1-201ENST00000515076 913 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 RNA5SP418-201ENST00000515951 117 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 RNA5SP96-201ENST00000516041 107 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 CDC42P3-201ENST00000518493 633 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 OR8Q1P-201ENST00000526467 655 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 LINC00556-201ENST00000569603 412 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 RN7SL32P-201ENST00000580514 281 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 MIR3611-201ENST00000584484 83 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AL589765.6-201ENST00000601909 549 ntBASIC5.79□□□□□ -1.48
HIPK4Q8NE63 AP003465.2-201ENST00000602571 373 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms