Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC7.09□□□□□ -1.28
VPS8Q8N3P4 AC002069.2-201ENST00000603580 883 ntBASIC7.09□□□□□ -1.28
VPS8Q8N3P4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.09□□□□□ -1.28
VPS8Q8N3P4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.09□□□□□ -1.28
VPS8Q8N3P4 AL121890.3-201ENST00000618494 516 ntBASIC7.09□□□□□ -1.28
VPS8Q8N3P4 AC002044.3-201ENST00000623314 541 ntBASIC7.09□□□□□ -1.28
VPS8Q8N3P4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
VPS8Q8N3P4 AC026951.1-201ENST00000559530 2459 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 RNU1-63P-201ENST00000383902 164 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 CBX1P1-201ENST00000440184 427 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 Z95152.1-201ENST00000453556 656 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 MTND2P28-201ENST00000457540 1044 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 RPL7AP52-201ENST00000458096 790 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 RPL23AP24-201ENST00000458203 385 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 AC005520.3-201ENST00000602874 370 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 AL035461.2-201ENST00000619201 524 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 MIR6758-201ENST00000620653 63 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 AC006065.6-201ENST00000625201 545 ntBASIC7.08□□□□□ -1.28
VPS8Q8N3P4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
VPS8Q8N3P4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AL137918.1-201ENST00000624542 1922 ntBASIC7.07□□□□□ -1.28
VPS8Q8N3P4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AL133268.1-201ENST00000405676 1401 ntBASIC7.07□□□□□ -1.28
VPS8Q8N3P4 NFYAP1-201ENST00000431953 972 ntBASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AL031584.1-201ENST00000447169 754 ntBASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AL591473.1-201ENST00000464297 313 ntBASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AC011276.1-201ENST00000469688 323 ntBASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 IGLVIV-65-201ENST00000517313 360 ntBASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 ADAD1P2-201ENST00000588476 646 ntBASIC7.07□□□□□ -1.28
VPS8Q8N3P4 COX6CP4-201ENST00000605798 228 ntBASIC7.07□□□□□ -1.28
VPS8Q8N3P4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS8Q8N3P4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC7.06□□□□□ -1.28
VPS8Q8N3P4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
VPS8Q8N3P4 IGKV7-3-201ENST00000357453 298 ntBASIC7.06□□□□□ -1.28
VPS8Q8N3P4 AC009480.2-201ENST00000422916 432 ntBASIC7.06□□□□□ -1.28
VPS8Q8N3P4 AC091390.1-201ENST00000433904 331 ntBASIC7.06□□□□□ -1.28
VPS8Q8N3P4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.06□□□□□ -1.28
VPS8Q8N3P4 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.06□□□□□ -1.28
VPS8Q8N3P4 RN7SL98P-201ENST00000462271 300 ntBASIC7.06□□□□□ -1.28
VPS8Q8N3P4 USP9YP2-201ENST00000504503 1000 ntBASIC7.06□□□□□ -1.28
VPS8Q8N3P4 USP9YP1-201ENST00000513521 1002 ntBASIC7.06□□□□□ -1.28
VPS8Q8N3P4 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.06□□□□□ -1.28
VPS8Q8N3P4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.06□□□□□ -1.28
VPS8Q8N3P4 AC091178.1-203ENST00000584586 279 ntBASIC7.06□□□□□ -1.28
VPS8Q8N3P4 RPL7P50-201ENST00000600588 727 ntBASIC7.06□□□□□ -1.28
VPS8Q8N3P4 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.06□□□□□ -1.28
VPS8Q8N3P4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
VPS8Q8N3P4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VPS8Q8N3P4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VPS8Q8N3P4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 FCF1P5-201ENST00000406490 482 ntBASIC7.05□□□□□ -1.28
VPS8Q8N3P4 AC114495.1-201ENST00000441274 436 ntBASIC7.05□□□□□ -1.28
VPS8Q8N3P4 RPL21P133-201ENST00000443666 476 ntBASIC7.05□□□□□ -1.28
VPS8Q8N3P4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 MIR4284-201ENST00000578924 81 ntBASIC7.05□□□□□ -1.28
VPS8Q8N3P4 RNF138P2-201ENST00000603490 592 ntBASIC7.05□□□□□ -1.28
VPS8Q8N3P4 AC007546.1-201ENST00000619452 559 ntBASIC7.05□□□□□ -1.28
VPS8Q8N3P4 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.05□□□□□ -1.28
VPS8Q8N3P4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms