Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AL354854.1-201ENST00000455940 1363 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PCDH1Q08174 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDH1Q08174 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 MIR431-201ENST00000385266 114 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 AL356057.2-201ENST00000403318 432 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 RPL5P20-201ENST00000403848 896 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 NACAP7-201ENST00000407371 609 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 USP9YP20-201ENST00000419224 558 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDH1Q08174 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AL592114.2-201ENST00000440142 532 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 RPS19P6-201ENST00000441327 433 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 MTND5P14-201ENST00000441481 1267 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDH1Q08174 RPL36AP55-201ENST00000454114 305 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 AC091564.1-201ENST00000464563 479 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 RN7SL390P-201ENST00000470634 284 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 RBM43P1-201ENST00000476891 1081 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 FTH1P8-201ENST00000498161 514 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 NDUFA5P12-201ENST00000503796 343 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDH1Q08174 IGHV3-57-201ENST00000520143 280 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 AP005639.2-201ENST00000527592 928 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AL157687.1-201ENST00000554853 619 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AL139286.1-201ENST00000604465 483 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AP003400.3-201ENST00000624904 346 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 SNX18P10-201ENST00000625014 519 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH1Q08174 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 UGT2B26P-201ENST00000508672 1613 ntBASIC6.49□□□□□ -1.37
PCDH1Q08174 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
PCDH1Q08174 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH1Q08174 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
PCDH1Q08174 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH1Q08174 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH1Q08174 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH1Q08174 AC010168.2-201ENST00000562691 5428 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH1Q08174 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH1Q08174 BX284613.1-201ENST00000452221 1641 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 DBF4P1-201ENST00000412976 1892 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 AC046144.1-201ENST00000478559 1853 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PCDH1Q08174 RNA5SP188-201ENST00000362916 129 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 RNA5SP429-201ENST00000363688 109 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 UBBP1-201ENST00000392399 473 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 AL034374.1-201ENST00000406329 351 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 AL139100.1-201ENST00000408001 498 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 RN7SKP188-201ENST00000410789 317 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH1Q08174 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH1Q08174 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH1Q08174 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH1Q08174 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH1Q08174 AL157884.1-201ENST00000424561 454 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH1Q08174 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH1Q08174 UOX-201ENST00000471089 899 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH1Q08174 RN7SL849P-201ENST00000485236 295 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 RN7SL868P-201ENST00000485915 303 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 HMGN1P12-201ENST00000499125 195 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 SAP18P1-201ENST00000512058 390 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH1Q08174 OR52H2P-201ENST00000514607 902 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH1Q08174 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 CENPUP1-201ENST00000526649 1202 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH1Q08174 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms