Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
BRCA2P51587 DMD-222ENST00000474231 5209 ntTSL 5 BASIC4.87□□□□□ -1.63
BRCA2P51587 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
BRCA2P51587 HSPD1P15-201ENST00000505573 1122 ntBASIC4.87□□□□□ -1.63
BRCA2P51587 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
BRCA2P51587 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.87□□□□□ -1.63
BRCA2P51587 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.87□□□□□ -1.63
BRCA2P51587 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC4.87□□□□□ -1.63
BRCA2P51587 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.87□□□□□ -1.63
BRCA2P51587 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.87□□□□□ -1.63
BRCA2P51587 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
BRCA2P51587 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC4.87□□□□□ -1.63
BRCA2P51587 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
BRCA2P51587 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.87□□□□□ -1.63
BRCA2P51587 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
BRCA2P51587 ISCUP1-201ENST00000454451 448 ntBASIC4.87□□□□□ -1.63
BRCA2P51587 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.87□□□□□ -1.63
BRCA2P51587 AC005618.4-201ENST00000625053 554 ntBASIC4.87□□□□□ -1.63
BRCA2P51587 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.87□□□□□ -1.63
BRCA2P51587 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
BRCA2P51587 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 RAB9AP3-201ENST00000412737 573 ntBASIC4.87□□□□□ -1.63
BRCA2P51587 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.87□□□□□ -1.63
BRCA2P51587 RAB9AP1-201ENST00000449393 573 ntBASIC4.87□□□□□ -1.63
BRCA2P51587 AC024451.1-201ENST00000508013 779 ntBASIC4.87□□□□□ -1.63
BRCA2P51587 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRCA2P51587 TVP23BP1-201ENST00000557500 617 ntBASIC4.87□□□□□ -1.63
BRCA2P51587 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.87□□□□□ -1.63
BRCA2P51587 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.87□□□□□ -1.63
BRCA2P51587 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC4.86□□□□□ -1.63
BRCA2P51587 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCA2P51587 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCA2P51587 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
BRCA2P51587 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
BRCA2P51587 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCA2P51587 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRCA2P51587 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.86□□□□□ -1.63
BRCA2P51587 OR4K6P-201ENST00000416478 897 ntBASIC4.86□□□□□ -1.63
BRCA2P51587 AC104978.1-201ENST00000449387 391 ntBASIC4.86□□□□□ -1.63
BRCA2P51587 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRCA2P51587 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.86□□□□□ -1.63
BRCA2P51587 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.86□□□□□ -1.63
BRCA2P51587 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCA2P51587 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRCA2P51587 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRCA2P51587 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRCA2P51587 AL691449.1-201ENST00000426570 421 ntBASIC4.86□□□□□ -1.63
BRCA2P51587 AL451139.1-201ENST00000434718 346 ntBASIC4.86□□□□□ -1.63
BRCA2P51587 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.86□□□□□ -1.63
BRCA2P51587 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.86□□□□□ -1.63
BRCA2P51587 AL159169.3-201ENST00000608871 561 ntBASIC4.86□□□□□ -1.63
BRCA2P51587 MIR6500-201ENST00000622700 86 ntBASIC4.86□□□□□ -1.63
BRCA2P51587 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRCA2P51587 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BRCA2P51587 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BRCA2P51587 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCA2P51587 ADAM5-202ENST00000399789 1942 ntBASIC4.86□□□□□ -1.63
BRCA2P51587 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
BRCA2P51587 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
BRCA2P51587 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BRCA2P51587 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC4.86□□□□□ -1.63
BRCA2P51587 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
BRCA2P51587 OR8F1P-201ENST00000425243 930 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 PPIAP13-201ENST00000434706 478 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.85□□□□□ -1.63
BRCA2P51587 AC113403.1-201ENST00000604910 193 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 OR7A19P-201ENST00000608051 733 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 AL021997.2-201ENST00000615674 271 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRCA2P51587 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRCA2P51587 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRCA2P51587 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRCA2P51587 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRCA2P51587 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRCA2P51587 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRCA2P51587 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.85□□□□□ -1.63
BRCA2P51587 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
BRCA2P51587 RNU1-14P-201ENST00000362759 152 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRCA2P51587 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.85□□□□□ -1.63
BRCA2P51587 AK4P6-201ENST00000505168 528 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.85□□□□□ -1.63
BRCA2P51587 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.85□□□□□ -1.63
BRCA2P51587 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.85□□□□□ -1.63
BRCA2P51587 AC116312.1-201ENST00000606841 314 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
BRCA2P51587 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
BRCA2P51587 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms