Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 OR4G3P-201ENST00000633500 913 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.72□□□□□ -1.49
CIITAP33076 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CIITAP33076 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CIITAP33076 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.72□□□□□ -1.49
CIITAP33076 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CIITAP33076 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CIITAP33076 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CIITAP33076 MAPK10-328ENST00000641553 4009 ntBASIC5.71□□□□□ -1.49
CIITAP33076 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.71□□□□□ -1.49
CIITAP33076 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CIITAP33076 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CIITAP33076 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
CIITAP33076 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.71□□□□□ -1.49
CIITAP33076 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.49
CIITAP33076 TRIM51GP-201ENST00000534741 1350 ntBASIC5.71□□□□□ -1.5
CIITAP33076 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CIITAP33076 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CIITAP33076 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CIITAP33076 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.71□□□□□ -1.5
CIITAP33076 RNU6-1251P-201ENST00000364502 107 ntBASIC5.71□□□□□ -1.5
CIITAP33076 RNU6-609P-201ENST00000365459 107 ntBASIC5.71□□□□□ -1.5
CIITAP33076 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CIITAP33076 ST13P16-201ENST00000401760 781 ntBASIC5.71□□□□□ -1.5
CIITAP33076 MTATP6P31-201ENST00000406985 692 ntBASIC5.71□□□□□ -1.5
CIITAP33076 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.71□□□□□ -1.5
CIITAP33076 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.71□□□□□ -1.5
CIITAP33076 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.71□□□□□ -1.5
CIITAP33076 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CIITAP33076 AL450023.3-201ENST00000440592 271 ntBASIC5.71□□□□□ -1.5
CIITAP33076 AC004980.3-201ENST00000447046 365 ntBASIC5.71□□□□□ -1.5
CIITAP33076 CCRL1P1-201ENST00000449542 1053 ntBASIC5.71□□□□□ -1.5
CIITAP33076 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CIITAP33076 PCNAP1-201ENST00000505363 709 ntBASIC5.71□□□□□ -1.5
CIITAP33076 AC118282.1-201ENST00000506408 765 ntBASIC5.71□□□□□ -1.5
CIITAP33076 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.71□□□□□ -1.5
CIITAP33076 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.71□□□□□ -1.5
CIITAP33076 AP000676.2-201ENST00000529711 301 ntBASIC5.71□□□□□ -1.5
CIITAP33076 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CIITAP33076 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.71□□□□□ -1.5
CIITAP33076 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.71□□□□□ -1.5
CIITAP33076 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.71□□□□□ -1.5
CIITAP33076 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.71□□□□□ -1.5
CIITAP33076 NDUFB4P11-201ENST00000560510 395 ntBASIC5.71□□□□□ -1.5
CIITAP33076 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.71□□□□□ -1.5
CIITAP33076 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.71□□□□□ -1.5
CIITAP33076 AL022394.1-201ENST00000606979 292 ntBASIC5.71□□□□□ -1.5
CIITAP33076 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.71□□□□□ -1.5
CIITAP33076 AC079298.2-201ENST00000623885 459 ntBASIC5.71□□□□□ -1.5
CIITAP33076 AC010608.3-201ENST00000625048 527 ntBASIC5.71□□□□□ -1.5
CIITAP33076 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.71□□□□□ -1.5
CIITAP33076 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CIITAP33076 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.71□□□□□ -1.5
CIITAP33076 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.71□□□□□ -1.5
CIITAP33076 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CIITAP33076 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CIITAP33076 INTS6P1-201ENST00000504674 2530 ntBASIC5.71□□□□□ -1.5
CIITAP33076 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CIITAP33076 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CIITAP33076 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CIITAP33076 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 RN7SKP95-201ENST00000362860 303 ntBASIC5.7□□□□□ -1.5
CIITAP33076 RNA5SP123-201ENST00000363244 119 ntBASIC5.7□□□□□ -1.5
CIITAP33076 SNORA74A-201ENST00000364089 198 ntBASIC5.7□□□□□ -1.5
CIITAP33076 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CIITAP33076 RN7SKP16-201ENST00000410180 299 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.7□□□□□ -1.5
CIITAP33076 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.7□□□□□ -1.5
CIITAP33076 MTCO2P17-201ENST00000424336 677 ntBASIC5.7□□□□□ -1.5
CIITAP33076 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.7□□□□□ -1.5
CIITAP33076 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.7□□□□□ -1.5
CIITAP33076 AL606517.1-201ENST00000446914 387 ntBASIC5.7□□□□□ -1.5
CIITAP33076 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.7□□□□□ -1.5
CIITAP33076 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.7□□□□□ -1.5
CIITAP33076 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.7□□□□□ -1.5
CIITAP33076 CLIC4P1-201ENST00000453177 535 ntBASIC5.7□□□□□ -1.5
CIITAP33076 HMGB1P4-201ENST00000455362 567 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.7□□□□□ -1.5
CIITAP33076 RN7SL826P-201ENST00000479724 288 ntBASIC5.7□□□□□ -1.5
CIITAP33076 RPL23AP73-201ENST00000492507 471 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AL049874.2-201ENST00000492636 288 ntBASIC5.7□□□□□ -1.5
CIITAP33076 RNU6-889P-201ENST00000517189 103 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AC012339.2-201ENST00000523996 453 ntBASIC5.7□□□□□ -1.5
CIITAP33076 OR4V1P-201ENST00000525394 1140 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.7□□□□□ -1.5
CIITAP33076 AC008033.2-201ENST00000542626 177 ntBASIC5.7□□□□□ -1.5
CIITAP33076 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.7□□□□□ -1.5
CIITAP33076 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.7□□□□□ -1.5
CIITAP33076 MIMT1-201ENST00000597105 1050 ntBASIC5.7□□□□□ -1.5
CIITAP33076 OR51C1P-201ENST00000608504 942 ntBASIC5.7□□□□□ -1.5
CIITAP33076 EIF3FP1-201ENST00000613970 806 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AC090510.2-201ENST00000617465 629 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AL133370.2-201ENST00000619934 439 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AP000943.4-201ENST00000622912 357 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms