Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC016027.4-201ENST00000450866 277 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 OR52E3P-201ENST00000452083 936 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 RPS27AP3-201ENST00000453803 454 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 HMGN3P1-201ENST00000453847 193 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 RFC5P1-201ENST00000454419 874 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 RPL5P24-201ENST00000463742 885 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 AC023194.2-201ENST00000465398 406 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF4P23510 AC004263.1-201ENST00000479327 332 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 RPL23AP40-201ENST00000487630 390 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AC090058.1-201ENST00000498788 435 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 OR7E99P-201ENST00000505750 922 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF4P23510 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF4P23510 RNA5SP473-201ENST00000516402 125 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 RNA5SP434-201ENST00000516647 121 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF4P23510 SOD1P3-201ENST00000518682 454 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF4P23510 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF4P23510 OR5M2P-201ENST00000529003 936 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AC107918.3-201ENST00000533272 382 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 OR8G3P-201ENST00000533406 921 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF4P23510 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AC063949.1-201ENST00000552900 865 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 SETP1-201ENST00000556014 845 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AC116553.2-201ENST00000564203 463 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF4P23510 VN1R78P-201ENST00000597393 564 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 AC079315.1-201ENST00000602952 623 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF4P23510 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF4P23510 RN7SL261P-201ENST00000613441 282 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF4P23510 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
TNFSF4P23510 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AC025125.1-201ENST00000624743 1922 ntBASIC5.18□□□□□ -1.58
TNFSF4P23510 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFSF4P23510 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF4P23510 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF4P23510 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF4P23510 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF4P23510 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFSF4P23510 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF4P23510 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TNFSF4P23510 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
TNFSF4P23510 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
TNFSF4P23510 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF4P23510 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF4P23510 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFSF4P23510 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
TNFSF4P23510 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF4P23510 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF4P23510 AC004158.1-201ENST00000564508 4319 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF4P23510 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFSF4P23510 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFSF4P23510 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFSF4P23510 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF4P23510 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF4P23510 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFSF4P23510 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.17□□□□□ -1.58
TNFSF4P23510 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF4P23510 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TNFSF4P23510 FAM133CP-201ENST00000332869 704 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 OR10R3P-201ENST00000361688 942 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 RNU6-115P-201ENST00000364310 107 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 RNU6-444P-201ENST00000383988 108 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 SNORA51.9-201ENST00000384295 124 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TNFSF4P23510 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF4P23510 MTND4P13-201ENST00000402078 1023 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFSF4P23510 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFSF4P23510 AC245096.1-201ENST00000413104 546 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 AL096829.1-201ENST00000413677 457 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 AL008987.1-201ENST00000415528 237 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFSF4P23510 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFSF4P23510 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFSF4P23510 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFSF4P23510 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFSF4P23510 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFSF4P23510 TUBB4BP6-201ENST00000437576 479 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFSF4P23510 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFSF4P23510 ATP5LP2-201ENST00000440646 311 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 RPL23AP76-201ENST00000441860 458 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 PPIAP27-201ENST00000453800 265 ntBASIC5.17□□□□□ -1.58
TNFSF4P23510 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms