Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 AL627171.1-201ENST00000618845 1308 ntBASIC4.9□□□□□ -1.63
NKX2-2O95096 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX2-2O95096 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NKX2-2O95096 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NKX2-2O95096 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX2-2O95096 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
NKX2-2O95096 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.9□□□□□ -1.63
NKX2-2O95096 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.9□□□□□ -1.63
NKX2-2O95096 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-2O95096 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-2O95096 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-2O95096 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.89□□□□□ -1.63
NKX2-2O95096 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AC006210.2-201ENST00000367074 1545 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-2O95096 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-2O95096 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-2O95096 RNU6-543P-201ENST00000362576 108 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-2O95096 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-2O95096 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-2O95096 RNU6-98P-201ENST00000384173 107 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 MIR105-1-201ENST00000385222 81 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 RNU1-149P-201ENST00000390870 161 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-2O95096 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-2O95096 FAM96AP1-201ENST00000430879 482 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 CLUHP1-201ENST00000435012 1190 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AL645638.1-201ENST00000440519 361 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AL391987.1-201ENST00000441025 200 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-2O95096 ARL5AP2-201ENST00000444698 533 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AC104687.1-201ENST00000485829 412 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 RN7SL101P-201ENST00000496350 279 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AC006427.1-201ENST00000514359 712 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 snoU109.6-201ENST00000516831 118 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-2O95096 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-2O95096 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 SULT1C2P2-201ENST00000562517 294 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-2O95096 MIR4789-201ENST00000577469 82 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-2O95096 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AC008814.1-201ENST00000603797 406 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AC079395.2-201ENST00000610982 737 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AL121890.3-201ENST00000618494 516 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 AC091932.2-201ENST00000623014 291 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AL049767.1-202ENST00000637826 242 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-2O95096 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-2O95096 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AC092079.1-201ENST00000558620 1985 ntBASIC4.89□□□□□ -1.63
NKX2-2O95096 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX2-2O95096 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NKX2-2O95096 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NKX2-2O95096 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX2-2O95096 AC010329.2-201ENST00000595195 2737 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-2O95096 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX2-2O95096 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NKX2-2O95096 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
NKX2-2O95096 SEC63P2-201ENST00000503863 1939 ntBASIC4.88□□□□□ -1.63
NKX2-2O95096 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
NKX2-2O95096 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX2-2O95096 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms