Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.49□□□□□ -1.53
PROM1O43490 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PROM1O43490 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PROM1O43490 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PROM1O43490 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PROM1O43490 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.49□□□□□ -1.53
PROM1O43490 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PROM1O43490 AC007342.7-201ENST00000624610 2337 ntBASIC5.48□□□□□ -1.53
PROM1O43490 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PROM1O43490 AL121950.1-201ENST00000624993 2077 ntBASIC5.48□□□□□ -1.53
PROM1O43490 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PROM1O43490 NEPNP-201ENST00000404786 1371 ntBASIC5.48□□□□□ -1.53
PROM1O43490 ANKRD36P1-201ENST00000344424 659 ntBASIC5.48□□□□□ -1.53
PROM1O43490 SNORA5.1-201ENST00000384275 131 ntBASIC5.48□□□□□ -1.53
PROM1O43490 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PROM1O43490 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
PROM1O43490 MRPL53P1-201ENST00000414323 319 ntBASIC5.48□□□□□ -1.53
PROM1O43490 USP9YP26-201ENST00000421008 661 ntBASIC5.48□□□□□ -1.53
PROM1O43490 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.48□□□□□ -1.53
PROM1O43490 HIGD1AP12-201ENST00000427832 281 ntBASIC5.48□□□□□ -1.53
PROM1O43490 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PROM1O43490 NDUFA5P10-201ENST00000432147 357 ntBASIC5.48□□□□□ -1.53
PROM1O43490 PCBP2P1-201ENST00000437262 977 ntBASIC5.48□□□□□ -1.53
PROM1O43490 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.48□□□□□ -1.53
PROM1O43490 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.48□□□□□ -1.53
PROM1O43490 AC104978.1-201ENST00000449387 391 ntBASIC5.48□□□□□ -1.53
PROM1O43490 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.48□□□□□ -1.53
PROM1O43490 RN7SL273P-201ENST00000481561 299 ntBASIC5.48□□□□□ -1.53
PROM1O43490 PDCL3P4-201ENST00000489621 720 ntBASIC5.48□□□□□ -1.53
PROM1O43490 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.48□□□□□ -1.53
PROM1O43490 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 MTND4P2-201ENST00000507767 1203 ntBASIC5.48□□□□□ -1.53
PROM1O43490 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.48□□□□□ -1.53
PROM1O43490 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.48□□□□□ -1.53
PROM1O43490 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 AC068305.2-201ENST00000550567 1205 ntBASIC5.48□□□□□ -1.53
PROM1O43490 SETP1-201ENST00000556014 845 ntBASIC5.48□□□□□ -1.53
PROM1O43490 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 AC018552.1-201ENST00000562099 811 ntBASIC5.48□□□□□ -1.53
PROM1O43490 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.48□□□□□ -1.53
PROM1O43490 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 AC019322.1-201ENST00000571869 389 ntBASIC5.48□□□□□ -1.53
PROM1O43490 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.48□□□□□ -1.53
PROM1O43490 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.48□□□□□ -1.53
PROM1O43490 AC013244.1-201ENST00000604279 193 ntBASIC5.48□□□□□ -1.53
PROM1O43490 NANOGP3-201ENST00000605855 286 ntBASIC5.48□□□□□ -1.53
PROM1O43490 AC010245.2-201ENST00000606908 1167 ntBASIC5.48□□□□□ -1.53
PROM1O43490 AL445423.1-201ENST00000609941 536 ntBASIC5.48□□□□□ -1.53
PROM1O43490 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.48□□□□□ -1.53
PROM1O43490 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.48□□□□□ -1.53
PROM1O43490 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.48□□□□□ -1.53
PROM1O43490 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PROM1O43490 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PROM1O43490 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PROM1O43490 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PROM1O43490 YES1P1-201ENST00000418510 1628 ntBASIC5.48□□□□□ -1.53
PROM1O43490 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PROM1O43490 AC021755.1-201ENST00000559747 1447 ntBASIC5.48□□□□□ -1.53
PROM1O43490 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
PROM1O43490 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PROM1O43490 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PROM1O43490 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PROM1O43490 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PROM1O43490 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PROM1O43490 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PROM1O43490 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.47□□□□□ -1.53
PROM1O43490 CASC19-281ENST00000642118 1554 ntBASIC5.47□□□□□ -1.53
PROM1O43490 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PROM1O43490 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PROM1O43490 RPL11P3-201ENST00000395256 523 ntBASIC5.47□□□□□ -1.53
PROM1O43490 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PROM1O43490 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 RAP1BP1-201ENST00000412709 553 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 VN1R21P-201ENST00000426703 765 ntBASIC5.47□□□□□ -1.53
PROM1O43490 BX323845.3-201ENST00000428215 527 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AC005345.1-201ENST00000431868 217 ntBASIC5.47□□□□□ -1.53
PROM1O43490 KCTD10P1-201ENST00000434203 625 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 NANOGP2-201ENST00000435391 727 ntBASIC5.47□□□□□ -1.53
PROM1O43490 GAPDHP48-201ENST00000436626 961 ntBASIC5.47□□□□□ -1.53
PROM1O43490 HSFY3P-201ENST00000444242 1191 ntBASIC5.47□□□□□ -1.53
PROM1O43490 GTF2IP12-201ENST00000456547 356 ntBASIC5.47□□□□□ -1.53
PROM1O43490 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.47□□□□□ -1.53
PROM1O43490 ACA64.1-201ENST00000459171 127 ntBASIC5.47□□□□□ -1.53
PROM1O43490 RPS17P15-201ENST00000475609 349 ntBASIC5.47□□□□□ -1.53
PROM1O43490 RAP1BP2-201ENST00000478270 544 ntBASIC5.47□□□□□ -1.53
PROM1O43490 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.47□□□□□ -1.53
PROM1O43490 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 RPF2P2-201ENST00000504693 896 ntBASIC5.47□□□□□ -1.53
PROM1O43490 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.47□□□□□ -1.53
PROM1O43490 AC105384.2-201ENST00000508433 640 ntBASIC5.47□□□□□ -1.53
PROM1O43490 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms