Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV4S1A1TA0A5B7 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV4S1A1TA0A5B7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV4S1A1TA0A5B7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SAMMSON-213ENST00000641336 1521 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MIR192-201ENST00000384915 110 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 HMGB3P7-201ENST00000400214 611 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MIR298-201ENST00000401212 88 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RPS4XP9-201ENST00000405151 780 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RPS16P5-201ENST00000406501 404 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 U3.35-201ENST00000408405 208 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RPL26P29-201ENST00000415623 438 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL358176.3-201ENST00000420757 454 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC245028.1-201ENST00000423259 256 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RGS17P1-201ENST00000423358 553 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC007559.1-201ENST00000428736 355 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SCAND3P1-201ENST00000439854 1060 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RPS26P2-201ENST00000440331 348 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 H2AFZP6-201ENST00000444403 394 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC006967.1-201ENST00000467608 589 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC116562.1-201ENST00000485355 781 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MRPS33P2-201ENST00000507850 322 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC092593.2-201ENST00000513866 913 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC137768.1-201ENST00000549998 553 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL512782.1-201ENST00000603093 364 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC020910.3-201ENST00000603701 874 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC000123.3-201ENST00000624029 4975 ntBASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 Z95327.2-201ENST00000414579 1873 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RNA5SP191-201ENST00000362585 102 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RNU6-249P-201ENST00000363016 102 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RNU4-44P-201ENST00000363050 141 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RNA5SP113-201ENST00000410486 84 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RBMY2TP-201ENST00000451162 947 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC008897.1-201ENST00000494006 347 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC243960.7-201ENST00000623532 707 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 TMEM30CP-203ENST00000637814 1035 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 BTBD10P1-201ENST00000549824 1352 ntBASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TCRBV4S1A1TA0A5B7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms