Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 HSPE1P22-201ENST00000456856 327 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 RPL12P24-201ENST00000474907 486 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 RN7SL447P-201ENST00000494711 245 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 MTATP6P1-201ENST00000514057 681 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 RNU6-276P-201ENST00000516114 96 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AGGF1P5-201ENST00000567900 919 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 BNIP3P32-201ENST00000600015 554 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC079610.2-201ENST00000604818 690 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC018695.5-201ENST00000605872 315 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC012557.1-201ENST00000607115 611 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC109309.2-201ENST00000612597 332 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC140725.3-201ENST00000616193 880 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 OR8G7P-201ENST00000616658 848 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 BX005214.3-202ENST00000619809 325 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC104623.2-202ENST00000623477 4002 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 NCOA4P2-201ENST00000340589 1813 ntBASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.23□□□□□ -1.57
TCRBV7S3A2A0A539 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 MIR1282-201ENST00000408865 101 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 CTSL3P-202ENST00000412179 788 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC010385.1-201ENST00000412374 256 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC092447.3-201ENST00000426027 686 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 HSPE1P16-201ENST00000426640 348 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 RPS4XP16-201ENST00000427198 791 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 FAM96AP1-201ENST00000430879 482 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AL358794.1-201ENST00000445689 381 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 RPL7P61-201ENST00000451721 751 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AL133445.1-201ENST00000467051 452 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 RN7SKP265-201ENST00000516448 223 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC012400.1-201ENST00000518452 381 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC090888.3-201ENST00000558917 509 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC069307.1-201ENST00000602820 447 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC006946.3-201ENST00000609791 756 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 RPSAP73-201ENST00000614820 330 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AP000648.2-201ENST00000624182 404 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AC097655.1-201ENST00000635075 318 ntBASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
TCRBV7S3A2A0A539 AL132640.2-201ENST00000559968 1698 ntBASIC5.21□□□□□ -1.57
TCRBV7S3A2A0A539 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TCRBV7S3A2A0A539 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.21□□□□□ -1.57
TCRBV7S3A2A0A539 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TCRBV7S3A2A0A539 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TCRBV7S3A2A0A539 AC011447.7-201ENST00000624228 1590 ntBASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 444.6 ms