Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 AC068213.1-201ENST00000625124 226 ntBASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 PISRT1-201ENST00000626175 531 ntBASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.31□□□□□ -1.08
HPS5Q9UPZ3 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 RN7SKP23-201ENST00000625159 4301 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC011379.1-201ENST00000508713 3025 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 MTCO1P12-201ENST00000414273 1543 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 RNA5SP382-201ENST00000363355 112 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 RNA5SP433-201ENST00000364491 114 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 RNU6-723P-201ENST00000383973 107 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 MIR1204-201ENST00000408388 67 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 MTND3P8-201ENST00000412909 339 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC097499.1-201ENST00000444277 208 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC097359.1-201ENST00000447946 463 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AL136981.1-203ENST00000451452 3844 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 GAPDHP53-201ENST00000458397 924 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC107398.1-201ENST00000486904 505 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 OR7E99P-201ENST00000505750 922 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 PABPC1P1-201ENST00000506347 591 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC107222.1-201ENST00000510899 637 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 RNU6-789P-201ENST00000517105 102 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AP000889.1-201ENST00000530968 660 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AL161670.1-201ENST00000554348 137 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 RN7SL230P-201ENST00000580835 303 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC012368.3-201ENST00000604190 219 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC104010.1-201ENST00000616889 150 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC015722.2-201ENST00000622210 551 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC089999.3-201ENST00000622440 577 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC092725.2-201ENST00000567658 1389 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 CKAP2P1-201ENST00000555477 2049 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 AC024560.2-201ENST00000507981 1497 ntBASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC8.3□□□□□ -1.08
HPS5Q9UPZ3 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 AC010894.1-201ENST00000313760 361 ntBASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 RNU5D-1-201ENST00000363299 116 ntBASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 RNU6-74P-201ENST00000384235 107 ntBASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 RNA5SP176-201ENST00000390956 110 ntBASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 RNU6-510P-201ENST00000391239 108 ntBASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 RNU2-42P-201ENST00000410697 113 ntBASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 HMGB1P11-201ENST00000413899 637 ntBASIC8.29□□□□□ -1.08
HPS5Q9UPZ3 BEND7P1-201ENST00000422058 457 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms