Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC015799.1-201ENST00000622996 3122 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 MTND4P34-201ENST00000572715 1371 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AL591135.1-201ENST00000401578 5914 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC008549.2-201ENST00000333482 706 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 RNU6-253P-201ENST00000384730 105 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 RN7SKP129-201ENST00000410288 299 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC068533.2-201ENST00000411872 306 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC244035.1-201ENST00000430042 390 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AL513175.1-201ENST00000431492 780 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AL590103.1-201ENST00000434488 307 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 RPS26P40-201ENST00000435209 294 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 ACTR3P2-201ENST00000439585 1257 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 ATP5C1P1-201ENST00000441945 895 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 SNRPBP1-201ENST00000443634 282 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AL360221.1-201ENST00000445989 335 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AL591363.1-201ENST00000450091 483 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC144530.1-201ENST00000452862 555 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 DDX39BP2-208ENST00000453923 258 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 MTCO2P18-201ENST00000457151 658 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 RPS27P20-201ENST00000492051 246 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 RPS6P4-201ENST00000494693 758 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC022206.1-201ENST00000495947 347 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC008429.2-201ENST00000523057 864 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC007954.1-201ENST00000554198 494 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 ANP32BP1-202ENST00000568553 737 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC064872.1-201ENST00000604823 1072 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC005962.2-201ENST00000611427 652 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC234782.5-201ENST00000617723 324 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC015804.1-201ENST00000622935 435 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC027575.3-201ENST00000583058 2747 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 AC022164.1-201ENST00000568767 2673 ntBASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM55Q9BYV6 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AL353743.4-201ENST00000422653 1547 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 WDR95P-201ENST00000425638 1542 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC107982.1-201ENST00000507171 1300 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC011477.1-204ENST00000623416 1325 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AC007842.1-201ENST00000597336 2039 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 RNU6-492P-201ENST00000363035 104 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 SNORA4.1-201ENST00000364263 144 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 RNA5SP279-201ENST00000365513 117 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 RN7SKP269-201ENST00000365545 319 ntBASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM55Q9BYV6 AL138880.1-201ENST00000405824 642 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms