Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AC021749.1-201ENST00000604322 607 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 LINC02211-204ENST00000642024 1070 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AC133552.1-201ENST00000569988 4007 ntBASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM54Q9BYV2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 OR4F13P-202ENST00000560066 2054 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC092681.1-201ENST00000297369 291 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 RNU6-1339P-201ENST00000363574 91 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 RNU6-98P-201ENST00000384173 107 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 SNORA5.1-201ENST00000384275 131 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 ATP5F1P2-201ENST00000398143 760 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 RPL24P2-201ENST00000421023 475 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC115283.1-201ENST00000427353 400 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MTND5P25-201ENST00000430499 799 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 NPM1P13-201ENST00000452663 865 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 RANP1-206ENST00000455094 651 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 VN1R40P-201ENST00000455196 941 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC091959.2-201ENST00000477363 321 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC114781.3-201ENST00000512083 142 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 SNORA70.20-201ENST00000516848 126 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MRPS36P3-201ENST00000519284 130 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 PMS2P3-207ENST00000529061 717 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MTCO2P15-201ENST00000532655 656 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC023813.2-201ENST00000564321 469 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MTND4LP24-201ENST00000572277 291 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MTCO1P40-201ENST00000574371 625 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 BNIP3P24-201ENST00000593398 557 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AL583856.2-201ENST00000606298 543 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC016877.3-201ENST00000606778 504 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 FAM72A-208ENST00000607379 1139 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MIR6071-201ENST00000616741 78 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MIR6133-201ENST00000617057 108 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AC022079.1-201ENST00000621546 602 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 ZNF876P-202ENST00000398732 1485 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 NSRP1P1-201ENST00000444067 1693 ntBASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM54Q9BYV2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms