Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 GLE1-202ENST00000372770 2218 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 IRF1-201ENST00000245414 3579 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SECISBP2-209ENST00000534113 3584 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RFFL-205ENST00000415395 1706 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 TULP3-202ENST00000448120 3076 ntAPPRIS P3 TSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC114490.2-201ENST00000487874 3099 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ELP4-210ENST00000638482 3084 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC36A2-204ENST00000521967 1471 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 WASF1-204ENST00000392586 2815 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC36-203ENST00000438782 2843 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC22A13-201ENST00000311856 2555 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 ARMT1-201ENST00000367294 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 TET1P1-201ENST00000426627 2301 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 BBS1-201ENST00000318312 3423 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 LIPH-202ENST00000424591 2065 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CYB5R3-202ENST00000361740 2938 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AC068700.1-201ENST00000565862 3754 ntBASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CD163L1-202ENST00000416109 4603 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SPIN3-205ENST00000638289 4614 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 PIK3CD-AS1-201ENST00000377320 1823 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 RCAN3-208ENST00000610732 2662 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP4-4Q9BYR3 STAT2-201ENST00000314128 3259 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GP2-204ENST00000381362 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 DEPDC5-204ENST00000400246 5551 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MARS2-201ENST00000282276 3019 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 APPL2-213ENST00000551662 2190 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC7A8-201ENST00000316902 4216 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 INTS9-211ENST00000521022 2544 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GANC-206ENST00000566442 2512 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC025280.2-201ENST00000625056 2547 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 C6orf222-201ENST00000437635 3736 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 LRAT-201ENST00000336356 4928 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AP000446.1-201ENST00000530045 2643 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ATG13-207ENST00000526508 4199 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GSG1-202ENST00000351606 1422 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC44A2-202ENST00000407327 3301 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL133279.3-201ENST00000563140 2352 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 STAT3-211ENST00000585517 3319 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 BROX-207ENST00000537020 3670 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 STX17-201ENST00000259400 2713 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ZNF829-203ENST00000520965 4977 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 NRG1-212ENST00000521670 1769 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GPR176-202ENST00000543580 1755 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 BCO2-213ENST00000531169 2493 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MTMR11-202ENST00000439741 2827 ntAPPRIS P4 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 EFCAB5-208ENST00000536908 2826 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 COL25A1-209ENST00000622134 4819 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 IMPDH1P3-201ENST00000399037 1549 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 NAGA-203ENST00000403363 1856 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 PCSK1-202ENST00000508626 2234 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 DPY19L1P1-201ENST00000417811 2594 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms