Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AP002791.1-201ENST00000623291 381 ntBASIC4.05□□□□□ -1.76
VGLL1Q99990 AC120349.3-201ENST00000624377 529 ntBASIC4.05□□□□□ -1.76
VGLL1Q99990 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.05□□□□□ -1.76
VGLL1Q99990 AC006927.2-201ENST00000639256 389 ntBASIC4.05□□□□□ -1.76
VGLL1Q99990 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VGLL1Q99990 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
VGLL1Q99990 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VGLL1Q99990 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
VGLL1Q99990 AL034370.1-201ENST00000397254 1590 ntBASIC4.05□□□□□ -1.76
VGLL1Q99990 MTCO1P15-201ENST00000529569 1526 ntBASIC4.05□□□□□ -1.76
VGLL1Q99990 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VGLL1Q99990 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VGLL1Q99990 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC000123.3-201ENST00000624029 4975 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 TRIM51GP-201ENST00000534741 1350 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 HSPA8P18-201ENST00000439846 1928 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 LINC01355-201ENST00000566551 5444 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 RAD1P1-201ENST00000231383 813 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 OR9G4-201ENST00000302957 984 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC234772.1-201ENST00000377927 937 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
VGLL1Q99990 SNORA16A-201ENST00000384342 137 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 RNU6-1005P-201ENST00000384519 107 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VGLL1Q99990 DBIP1-201ENST00000401435 260 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 MIR1271-201ENST00000408537 86 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 RN7SKP240-201ENST00000410583 375 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 OR51B3P-201ENST00000412287 913 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 CBX1P3-201ENST00000413296 527 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 UBE2V1P9-201ENST00000414760 368 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 GLUD1P9-201ENST00000420997 1173 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.04□□□□□ -1.76
VGLL1Q99990 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 ARF4P4-201ENST00000439608 520 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 MTCO1P53-201ENST00000441633 699 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.04□□□□□ -1.76
VGLL1Q99990 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AL031313.1-201ENST00000448435 256 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 HLA-DPA3-207ENST00000454398 229 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 RPS17P11-201ENST00000474297 293 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 RPL15P21-201ENST00000495592 567 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.04□□□□□ -1.76
VGLL1Q99990 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.04□□□□□ -1.76
VGLL1Q99990 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.04□□□□□ -1.76
VGLL1Q99990 MTND6P2-201ENST00000512226 524 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 RNA5SP271-201ENST00000516700 88 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.04□□□□□ -1.76
VGLL1Q99990 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AP006245.2-201ENST00000522004 300 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.04□□□□□ -1.76
VGLL1Q99990 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC087888.1-201ENST00000550884 1254 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 IGBP1P1-201ENST00000554337 1009 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AL121839.1-201ENST00000556233 1185 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC106734.1-201ENST00000568646 663 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AP000919.1-202ENST00000581139 1264 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 CBX3P2-202ENST00000583365 535 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC084373.1-201ENST00000603311 235 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AC099785.1-201ENST00000605697 437 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AC106052.1-201ENST00000608029 497 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AL451049.1-201ENST00000608672 497 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AC093783.1-201ENST00000612976 329 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AL355493.4-201ENST00000618530 292 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC138907.10-201ENST00000623708 983 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AP003400.3-201ENST00000624904 346 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 AC017104.5-201ENST00000637647 639 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 AC132825.1-201ENST00000463573 2247 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 LINC01963-201ENST00000562038 3148 ntBASIC4.04□□□□□ -1.76
VGLL1Q99990 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VGLL1Q99990 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
VGLL1Q99990 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms