Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC021678.3-201ENST00000517893 476 ntBASIC6.33□□□□□ -1.4
ERCC4Q92889 AC138832.1-201ENST00000522871 556 ntBASIC6.33□□□□□ -1.4
ERCC4Q92889 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.33□□□□□ -1.4
ERCC4Q92889 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.33□□□□□ -1.4
ERCC4Q92889 AC122688.1-201ENST00000541494 223 ntBASIC6.33□□□□□ -1.4
ERCC4Q92889 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC4Q92889 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.33□□□□□ -1.4
ERCC4Q92889 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC4Q92889 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.33□□□□□ -1.4
ERCC4Q92889 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.33□□□□□ -1.4
ERCC4Q92889 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.33□□□□□ -1.4
ERCC4Q92889 AL390318.1-201ENST00000624564 687 ntBASIC6.33□□□□□ -1.4
ERCC4Q92889 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.33□□□□□ -1.4
ERCC4Q92889 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ERCC4Q92889 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC4Q92889 AC104454.1-201ENST00000421341 1401 ntBASIC6.33□□□□□ -1.4
ERCC4Q92889 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC4Q92889 AC021755.1-201ENST00000559747 1447 ntBASIC6.33□□□□□ -1.4
ERCC4Q92889 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC4Q92889 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC002525.1-201ENST00000624392 1622 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 CASC19-248ENST00000641674 1356 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ERCC4Q92889 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 MIR1302-8-201ENST00000408342 128 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC079809.1-201ENST00000415468 276 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AL008987.1-201ENST00000415528 237 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC4Q92889 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC4Q92889 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 ETF1P3-201ENST00000430422 1160 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.32□□□□□ -1.4
ERCC4Q92889 TMEM183AP1-205ENST00000432739 290 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC4Q92889 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC4Q92889 NDUFB4P8-201ENST00000435351 367 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 TUBB4BP6-201ENST00000437576 479 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AL359265.1-201ENST00000440296 795 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 RPL5P25-201ENST00000441148 775 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC4Q92889 LINC02210-201ENST00000444561 288 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC4Q92889 OTX2P1-201ENST00000450956 354 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 ATG12P2-201ENST00000456830 416 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AC068228.1-201ENST00000461723 211 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 RPL5P13-201ENST00000462840 709 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 RAP1BP2-201ENST00000478270 544 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.32□□□□□ -1.4
ERCC4Q92889 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC118282.2-201ENST00000508739 374 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC013701.1-201ENST00000522657 465 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC4Q92889 TRIM51DP-201ENST00000529746 596 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.32□□□□□ -1.4
ERCC4Q92889 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC011611.5-201ENST00000552477 578 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC007956.1-201ENST00000555623 542 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC090888.3-201ENST00000558917 509 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC4Q92889 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 MTND3P19-201ENST00000603825 345 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 FAM27E4-201ENST00000605259 342 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AL158042.1-201ENST00000605338 460 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC4Q92889 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.32□□□□□ -1.4
ERCC4Q92889 AC098679.4-201ENST00000624241 654 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 MIR1910-201ENST00000636955 80 ntBASIC6.32□□□□□ -1.4
ERCC4Q92889 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.32□□□□□ -1.4
ERCC4Q92889 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
ERCC4Q92889 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ERCC4Q92889 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.32□□□□□ -1.4
ERCC4Q92889 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms