Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MRRFP1-201ENST00000435941 1675 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC009831.5-201ENST00000624000 3189 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AP002001.2-201ENST00000529025 1469 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 RPS15AP38-201ENST00000413110 372 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 VN1R20P-201ENST00000425215 966 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC099782.1-201ENST00000425889 474 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 COX6CP12-201ENST00000446748 202 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 RN7SL552P-201ENST00000462094 276 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 RPL7P51-201ENST00000490532 749 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 MTCYBP18-201ENST00000501056 747 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC025459.1-201ENST00000504072 156 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC010587.2-201ENST00000511727 448 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC008837.2-201ENST00000513076 418 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 SETP21-201ENST00000514799 892 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 RN7SKP67-201ENST00000515905 235 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 AP003080.1-202ENST00000526526 915 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AL162632.2-201ENST00000553933 399 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 SMIM12P1-201ENST00000603004 274 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 LLPHP1-201ENST00000603571 367 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AL589743.6-201ENST00000611025 117 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC022509.4-201ENST00000621404 572 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC109454.4-201ENST00000623411 649 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC009033.1-201ENST00000624279 431 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF43Q68DV7 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.75□□□□□ -1.33
RNF43Q68DV7 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF43Q68DV7 MTCO1P25-201ENST00000414449 1799 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC000367.1-201ENST00000452711 1766 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 TEX21P-201ENST00000447107 1476 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF43Q68DV7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 Y_RNA.582-201ENST00000391023 95 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 YWHAZP6-201ENST00000399764 738 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 FAT1P1-201ENST00000406588 507 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 RPL21P50-201ENST00000417698 477 ntBASIC6.74□□□□□ -1.33
RNF43Q68DV7 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF43Q68DV7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms