Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RFX4Q33E94 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.48□□□□□ -1.69
RFX4Q33E94 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFX4Q33E94 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFX4Q33E94 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.48□□□□□ -1.69
RFX4Q33E94 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFX4Q33E94 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFX4Q33E94 RN7SKP160-201ENST00000363804 340 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 U3.25-201ENST00000391209 220 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 RPS24P12-201ENST00000402084 394 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 AL136116.2-201ENST00000404020 785 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 NPM1P4-201ENST00000414095 812 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 OR2AM1P-201ENST00000422137 422 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.48□□□□□ -1.69
RFX4Q33E94 AL451139.1-201ENST00000434718 346 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.48□□□□□ -1.69
RFX4Q33E94 AL391987.1-201ENST00000441025 200 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 TCEA1P1-201ENST00000449716 880 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 IGHV5-78-201ENST00000450948 295 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.48□□□□□ -1.69
RFX4Q33E94 OR2AO1P-201ENST00000476497 403 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
RFX4Q33E94 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.48□□□□□ -1.69
RFX4Q33E94 RNA5SP392-201ENST00000516905 112 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 RNU6-943P-201ENST00000516960 98 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.48□□□□□ -1.69
RFX4Q33E94 AC122134.1-201ENST00000565664 1104 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.48□□□□□ -1.69
RFX4Q33E94 MIR4310-201ENST00000582950 57 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.48□□□□□ -1.69
RFX4Q33E94 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.48□□□□□ -1.69
RFX4Q33E94 AC010615.3-201ENST00000597319 394 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 AC005520.3-201ENST00000602874 370 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 AC009237.17-201ENST00000618111 748 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 AL158062.1-201ENST00000619632 745 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 AC099494.2-201ENST00000623371 978 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFX4Q33E94 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFX4Q33E94 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFX4Q33E94 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RFX4Q33E94 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFX4Q33E94 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RFX4Q33E94 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFX4Q33E94 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RFX4Q33E94 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFX4Q33E94 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RFX4Q33E94 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFX4Q33E94 AL121950.1-201ENST00000624993 2077 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RFX4Q33E94 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RFX4Q33E94 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFX4Q33E94 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFX4Q33E94 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFX4Q33E94 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFX4Q33E94 OR56B2P-201ENST00000317102 954 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.47□□□□□ -1.69
RFX4Q33E94 U3.2-201ENST00000362981 210 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 RNA5SP28-201ENST00000363841 119 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFX4Q33E94 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RFX4Q33E94 SNORA68.2-201ENST00000391263 128 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 DUTP5-201ENST00000406790 469 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 RN7SKP126-201ENST00000411143 300 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 RPL35AP24-201ENST00000413846 330 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 CHEK2P5-201ENST00000423877 246 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 CFL1P1-202ENST00000432948 411 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.47□□□□□ -1.69
RFX4Q33E94 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 AP002371.1-201ENST00000463604 433 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 AC097484.1-201ENST00000471148 389 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 TRBV8-1-201ENST00000481590 279 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFX4Q33E94 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 RN7SKP260-201ENST00000516907 149 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 RNU6-709P-201ENST00000517257 104 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.47□□□□□ -1.69
RFX4Q33E94 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.47□□□□□ -1.69
RFX4Q33E94 MTND2P17-201ENST00000550281 688 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 AC084033.1-201ENST00000550830 633 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 NMNAT1P1-201ENST00000554095 876 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 CD24P2-201ENST00000565486 219 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 AC012146.2-201ENST00000576545 416 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.47□□□□□ -1.69
RFX4Q33E94 AL356752.1-201ENST00000615844 593 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFX4Q33E94 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.47□□□□□ -1.69
RFX4Q33E94 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
RFX4Q33E94 AC107021.2-201ENST00000567714 2095 ntBASIC4.47□□□□□ -1.69
RFX4Q33E94 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.47□□□□□ -1.69
RFX4Q33E94 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFX4Q33E94 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms