Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 GJA6P-201ENST00000415117 1042 ntBASIC4.22□□□□□ -1.73
UBA52P62987 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.22□□□□□ -1.73
UBA52P62987 PDSS1P1-201ENST00000422953 1114 ntBASIC4.22□□□□□ -1.73
UBA52P62987 USP9YP9-201ENST00000429406 715 ntBASIC4.22□□□□□ -1.73
UBA52P62987 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.22□□□□□ -1.73
UBA52P62987 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.22□□□□□ -1.73
UBA52P62987 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.22□□□□□ -1.73
UBA52P62987 AC091180.1-201ENST00000462104 372 ntBASIC4.22□□□□□ -1.73
UBA52P62987 RN7SL738P-201ENST00000470264 297 ntBASIC4.22□□□□□ -1.73
UBA52P62987 RPL37AP8-201ENST00000494116 276 ntBASIC4.22□□□□□ -1.73
UBA52P62987 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.22□□□□□ -1.73
UBA52P62987 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.22□□□□□ -1.73
UBA52P62987 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UBA52P62987 AC063949.1-201ENST00000552900 865 ntBASIC4.22□□□□□ -1.73
UBA52P62987 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.22□□□□□ -1.73
UBA52P62987 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.22□□□□□ -1.73
UBA52P62987 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.22□□□□□ -1.73
UBA52P62987 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.22□□□□□ -1.73
UBA52P62987 AC007066.2-202ENST00000566531 914 ntBASIC4.22□□□□□ -1.73
UBA52P62987 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UBA52P62987 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.22□□□□□ -1.73
UBA52P62987 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.22□□□□□ -1.73
UBA52P62987 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.22□□□□□ -1.73
UBA52P62987 AF230666.2-201ENST00000602328 725 ntBASIC4.22□□□□□ -1.73
UBA52P62987 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.22□□□□□ -1.73
UBA52P62987 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.22□□□□□ -1.73
UBA52P62987 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBA52P62987 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.22□□□□□ -1.73
UBA52P62987 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBA52P62987 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBA52P62987 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
UBA52P62987 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.22□□□□□ -1.73
UBA52P62987 TLK1P1-201ENST00000456760 2440 ntBASIC4.22□□□□□ -1.73
UBA52P62987 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBA52P62987 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBA52P62987 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
UBA52P62987 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
UBA52P62987 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
UBA52P62987 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
UBA52P62987 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
UBA52P62987 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.21□□□□□ -1.74
UBA52P62987 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.21□□□□□ -1.74
UBA52P62987 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
UBA52P62987 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 MIR195-201ENST00000385194 87 ntBASIC4.21□□□□□ -1.74
UBA52P62987 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
UBA52P62987 AL356968.2-201ENST00000412769 1257 ntBASIC4.21□□□□□ -1.74
UBA52P62987 DDX39BP1-205ENST00000422507 192 ntBASIC4.21□□□□□ -1.74
UBA52P62987 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.21□□□□□ -1.74
UBA52P62987 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.21□□□□□ -1.74
UBA52P62987 AL161722.2-201ENST00000434731 981 ntBASIC4.21□□□□□ -1.74
UBA52P62987 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.21□□□□□ -1.74
UBA52P62987 RPL7P16-201ENST00000479738 738 ntBASIC4.21□□□□□ -1.74
UBA52P62987 NIP7P2-201ENST00000485801 544 ntBASIC4.21□□□□□ -1.74
UBA52P62987 RN7SL205P-201ENST00000490174 284 ntBASIC4.21□□□□□ -1.74
UBA52P62987 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.21□□□□□ -1.74
UBA52P62987 RN7SKP260-201ENST00000516907 149 ntBASIC4.21□□□□□ -1.74
UBA52P62987 AC012400.1-201ENST00000518452 381 ntBASIC4.21□□□□□ -1.74
UBA52P62987 MYL12AP1-201ENST00000518490 515 ntBASIC4.21□□□□□ -1.74
UBA52P62987 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.21□□□□□ -1.74
UBA52P62987 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.21□□□□□ -1.74
UBA52P62987 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.21□□□□□ -1.74
UBA52P62987 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.21□□□□□ -1.74
UBA52P62987 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 ATP5J2P6-201ENST00000565203 266 ntBASIC4.21□□□□□ -1.74
UBA52P62987 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.21□□□□□ -1.74
UBA52P62987 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.21□□□□□ -1.74
UBA52P62987 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.21□□□□□ -1.74
UBA52P62987 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.21□□□□□ -1.74
UBA52P62987 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.21□□□□□ -1.74
UBA52P62987 RN7SL722P-201ENST00000617780 284 ntBASIC4.21□□□□□ -1.74
UBA52P62987 RN7SL565P-201ENST00000618246 284 ntBASIC4.21□□□□□ -1.74
UBA52P62987 AL731566.2-201ENST00000618971 317 ntBASIC4.21□□□□□ -1.74
UBA52P62987 AC015660.5-201ENST00000623238 564 ntBASIC4.21□□□□□ -1.74
UBA52P62987 AC112694.2-201ENST00000623697 768 ntBASIC4.21□□□□□ -1.74
UBA52P62987 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
UBA52P62987 AC092747.4-201ENST00000620519 1861 ntBASIC4.21□□□□□ -1.74
UBA52P62987 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
UBA52P62987 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBA52P62987 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
UBA52P62987 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBA52P62987 KPNA2P2-201ENST00000419546 1489 ntBASIC4.2□□□□□ -1.74
UBA52P62987 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.2□□□□□ -1.74
UBA52P62987 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UBA52P62987 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBA52P62987 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UBA52P62987 RNU1-108P-201ENST00000362556 161 ntBASIC4.2□□□□□ -1.74
UBA52P62987 RN7SKP149-201ENST00000363008 344 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms