Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC099654.9-201ENST00000637055 678 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC099654.8-201ENST00000637757 681 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLDN20P56880 ZNF652P1-201ENST00000442420 1309 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 AC235565.1-201ENST00000456962 1325 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN20P56880 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN20P56880 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CLDN20P56880 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN20P56880 AL034549.2-201ENST00000618285 3373 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN20P56880 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN20P56880 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLDN20P56880 UGT2B26P-201ENST00000508672 1613 ntBASIC4.86□□□□□ -1.63
CLDN20P56880 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CLDN20P56880 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN20P56880 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN20P56880 AL031595.2-201ENST00000624215 19071 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN20P56880 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
CLDN20P56880 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 UBBP2-201ENST00000376781 231 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 RNU6-468P-201ENST00000384003 109 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 RNU6-1320P-201ENST00000390838 107 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 RNU6-1269P-201ENST00000391139 107 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN20P56880 PNRC2P1-201ENST00000423940 420 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN20P56880 ARAFP2-201ENST00000440565 559 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN20P56880 GTF3AP5-201ENST00000442645 697 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 HMGB1P26-201ENST00000452520 628 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AL035090.1-201ENST00000454835 332 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN20P56880 RNU6-599P-201ENST00000459383 107 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 RNU6-1193P-201ENST00000459461 107 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN20P56880 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN20P56880 RPS17P11-201ENST00000474297 293 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 RPL7P39-201ENST00000481157 744 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN20P56880 TPT1P3-201ENST00000492841 512 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 RPS4XP14-201ENST00000493072 781 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN20P56880 CDH12P2-201ENST00000504393 298 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AC091912.1-201ENST00000511351 248 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN20P56880 EIF3KP3-201ENST00000514461 639 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 RNU6-941P-201ENST00000516346 108 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 RNU6-1308P-201ENST00000516817 103 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN20P56880 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 AL049779.2-201ENST00000553847 315 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN20P56880 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN20P56880 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLDN20P56880 RPL10P14-201ENST00000565265 298 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 CD24P2-201ENST00000565486 219 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 AC090666.1-201ENST00000578241 445 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN20P56880 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN20P56880 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN20P56880 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN20P56880 SUMO2P15-201ENST00000604285 278 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AC012557.1-201ENST00000607115 611 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 Z95327.3-201ENST00000610385 572 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AC008115.4-201ENST00000619780 775 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 RNU6-368P-201ENST00000620928 107 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN20P56880 RNU6-538P-201ENST00000622329 107 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLDN20P56880 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLDN20P56880 AL645568.2-201ENST00000432815 1337 ntBASIC4.85□□□□□ -1.63
CLDN20P56880 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.85□□□□□ -1.63
CLDN20P56880 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CLDN20P56880 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN20P56880 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN20P56880 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN20P56880 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN20P56880 AP005432.1-201ENST00000580891 3485 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.84□□□□□ -1.63
CLDN20P56880 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN20P56880 AC100778.3-201ENST00000580060 1750 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 AC011447.7-201ENST00000624228 1590 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLDN20P56880 OR1L6-202ENST00000373684 1044 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 RNU6-481P-201ENST00000384194 107 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 RNU6-729P-201ENST00000384399 107 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 MIR137-201ENST00000385223 102 ntBASIC4.84□□□□□ -1.63
CLDN20P56880 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CLDN20P56880 PPIAP9-201ENST00000403866 498 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms