Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH6P55285 SMG1P6-201ENST00000532337 2930 ntBASIC4.99□□□□□ -1.61
CDH6P55285 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH6P55285 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH6P55285 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH6P55285 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH6P55285 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH6P55285 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH6P55285 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH6P55285 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH6P55285 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH6P55285 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH6P55285 AL606537.1-201ENST00000607258 2011 ntBASIC4.98□□□□□ -1.61
CDH6P55285 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH6P55285 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH6P55285 AL592291.1-201ENST00000403830 352 ntBASIC4.98□□□□□ -1.61
CDH6P55285 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH6P55285 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH6P55285 VN1R37P-201ENST00000419096 748 ntBASIC4.98□□□□□ -1.61
CDH6P55285 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH6P55285 LINC00993-201ENST00000420453 540 ntBASIC4.98□□□□□ -1.61
CDH6P55285 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH6P55285 MRPL48P1-201ENST00000445390 636 ntBASIC4.98□□□□□ -1.61
CDH6P55285 AL031584.1-201ENST00000447169 754 ntBASIC4.98□□□□□ -1.61
CDH6P55285 RPL7L1P1-201ENST00000448259 785 ntBASIC4.98□□□□□ -1.61
CDH6P55285 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH6P55285 OTX2P1-201ENST00000450956 354 ntBASIC4.98□□□□□ -1.61
CDH6P55285 AC010733.1-201ENST00000451515 401 ntBASIC4.98□□□□□ -1.61
CDH6P55285 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH6P55285 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH6P55285 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH6P55285 GAPDHP56-201ENST00000506031 988 ntBASIC4.98□□□□□ -1.61
CDH6P55285 BTF3P13-201ENST00000513224 490 ntBASIC4.98□□□□□ -1.61
CDH6P55285 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH6P55285 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH6P55285 AC008033.2-201ENST00000542626 177 ntBASIC4.98□□□□□ -1.61
CDH6P55285 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH6P55285 MIR4646-201ENST00000580775 63 ntBASIC4.98□□□□□ -1.61
CDH6P55285 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH6P55285 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH6P55285 AC015871.5-202ENST00000623252 701 ntBASIC4.98□□□□□ -1.61
CDH6P55285 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH6P55285 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH6P55285 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH6P55285 AL445487.1-201ENST00000415694 1580 ntBASIC4.98□□□□□ -1.61
CDH6P55285 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH6P55285 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH6P55285 AC093591.2-201ENST00000565254 3843 ntBASIC4.98□□□□□ -1.61
CDH6P55285 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH6P55285 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CDH6P55285 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH6P55285 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH6P55285 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH6P55285 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH6P55285 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH6P55285 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CDH6P55285 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH6P55285 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH6P55285 SAMMSON-226ENST00000642089 1582 ntBASIC4.97□□□□□ -1.61
CDH6P55285 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CDH6P55285 U3.30-201ENST00000391308 210 ntBASIC4.97□□□□□ -1.61
CDH6P55285 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH6P55285 AP000580.1-201ENST00000404439 358 ntBASIC4.97□□□□□ -1.61
CDH6P55285 RN7SKP247-201ENST00000411094 308 ntBASIC4.97□□□□□ -1.61
CDH6P55285 AC114755.2-201ENST00000413520 361 ntBASIC4.97□□□□□ -1.61
CDH6P55285 OR2AM1P-201ENST00000422137 422 ntBASIC4.97□□□□□ -1.61
CDH6P55285 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH6P55285 AL138787.1-202ENST00000437804 898 ntBASIC4.97□□□□□ -1.61
CDH6P55285 AL591473.1-201ENST00000464297 313 ntBASIC4.97□□□□□ -1.61
CDH6P55285 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH6P55285 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH6P55285 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH6P55285 AC133555.2-201ENST00000550213 292 ntBASIC4.97□□□□□ -1.61
CDH6P55285 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH6P55285 FKBP1BP1-201ENST00000553366 325 ntBASIC4.97□□□□□ -1.61
CDH6P55285 AC018552.1-201ENST00000562099 811 ntBASIC4.97□□□□□ -1.61
CDH6P55285 RN7SL802P-201ENST00000577858 299 ntBASIC4.97□□□□□ -1.61
CDH6P55285 AC022726.1-201ENST00000587475 207 ntBASIC4.97□□□□□ -1.61
CDH6P55285 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH6P55285 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH6P55285 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH6P55285 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH6P55285 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CDH6P55285 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH6P55285 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CDH6P55285 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH6P55285 IRF5P1-201ENST00000504852 2164 ntBASIC4.97□□□□□ -1.61
CDH6P55285 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.61
CDH6P55285 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CDH6P55285 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.96□□□□□ -1.61
CDH6P55285 AC093775.1-201ENST00000624154 1868 ntBASIC4.96□□□□□ -1.61
CDH6P55285 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CDH6P55285 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CDH6P55285 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CDH6P55285 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH6P55285 THAP12P8-201ENST00000447914 2115 ntBASIC4.96□□□□□ -1.62
CDH6P55285 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDH6P55285 RNU6-1320P-201ENST00000390838 107 ntBASIC4.96□□□□□ -1.62
CDH6P55285 RNU6-1269P-201ENST00000391139 107 ntBASIC4.96□□□□□ -1.62
CDH6P55285 AL645733.1-201ENST00000402250 217 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms