Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCN3P51790 AC027338.1-201ENST00000514840 825 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 RNA5SP392-201ENST00000516905 112 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CLCN3P51790 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 NDUFB4P11-201ENST00000560510 395 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 UBE2FP2-201ENST00000566646 462 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLCN3P51790 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCN3P51790 PRPF19P1-201ENST00000584766 898 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCN3P51790 AC104785.1-201ENST00000603220 588 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 uc_338.18-201ENST00000615451 175 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 AC025016.1-201ENST00000616746 682 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 AC006249.1-201ENST00000621223 471 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCN3P51790 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 AL121839.2-201ENST00000565058 6943 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.48□□□□□ -1.53
CLCN3P51790 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CLCN3P51790 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CLCN3P51790 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCN3P51790 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLCN3P51790 ECM1P2-201ENST00000503354 1577 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCN3P51790 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLCN3P51790 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCN3P51790 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCN3P51790 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLCN3P51790 RNA5SP443-201ENST00000363083 132 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLCN3P51790 U3.23-201ENST00000391132 200 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 AL356057.1-202ENST00000402263 756 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCN3P51790 RPS27AP6-201ENST00000427962 448 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 AC007559.1-201ENST00000428736 355 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 MTND2P21-201ENST00000436242 1042 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 RPL5P25-201ENST00000441148 775 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 RPL7AP61-201ENST00000443410 636 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCN3P51790 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCN3P51790 RPS29P33-201ENST00000456717 146 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCN3P51790 HMGB1P3-201ENST00000502802 616 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 SUMO2P4-201ENST00000504193 276 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCN3P51790 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.47□□□□□ -1.53
CLCN3P51790 BNIP3P1-201ENST00000547295 580 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCN3P51790 CR383656.6-201ENST00000550518 394 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCN3P51790 AL512310.9-201ENST00000553311 948 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCN3P51790 AC011453.2-201ENST00000603737 729 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 AC015849.2-201ENST00000605738 409 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 AL096803.3-201ENST00000609032 532 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 AL158062.1-201ENST00000619632 745 ntBASIC5.47□□□□□ -1.53
CLCN3P51790 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCN3P51790 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCN3P51790 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCN3P51790 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLCN3P51790 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCN3P51790 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLCN3P51790 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCN3P51790 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CLCN3P51790 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CLCN3P51790 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCN3P51790 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCN3P51790 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLCN3P51790 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.46□□□□□ -1.53
CLCN3P51790 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CLCN3P51790 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CLCN3P51790 AC012618.3-205ENST00000637896 1496 ntBASIC5.46□□□□□ -1.53
CLCN3P51790 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCN3P51790 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CLCN3P51790 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCN3P51790 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCN3P51790 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCN3P51790 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCN3P51790 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCN3P51790 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLCN3P51790 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLCN3P51790 RN7SKP186-201ENST00000365371 303 ntBASIC5.46□□□□□ -1.54
CLCN3P51790 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.46□□□□□ -1.54
CLCN3P51790 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CLCN3P51790 RNU6-1176P-201ENST00000390955 107 ntBASIC5.46□□□□□ -1.54
CLCN3P51790 GSTA12P-201ENST00000402398 508 ntBASIC5.46□□□□□ -1.54
CLCN3P51790 RNA5SP113-201ENST00000410486 84 ntBASIC5.46□□□□□ -1.54
CLCN3P51790 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.46□□□□□ -1.54
CLCN3P51790 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.46□□□□□ -1.54
CLCN3P51790 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.46□□□□□ -1.54
CLCN3P51790 RPL23AP56-201ENST00000460778 453 ntBASIC5.46□□□□□ -1.54
CLCN3P51790 AC116562.1-201ENST00000485355 781 ntBASIC5.46□□□□□ -1.54
CLCN3P51790 NIFKP7-201ENST00000503365 834 ntBASIC5.46□□□□□ -1.54
CLCN3P51790 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCN3P51790 AC016559.2-201ENST00000510759 359 ntBASIC5.46□□□□□ -1.54
CLCN3P51790 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.46□□□□□ -1.54
CLCN3P51790 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.46□□□□□ -1.54
CLCN3P51790 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms