Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.78□□□□□ -1.64
CXCL12P48061 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.78□□□□□ -1.64
CXCL12P48061 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CXCL12P48061 AC022884.2-201ENST00000578535 580 ntBASIC4.78□□□□□ -1.64
CXCL12P48061 AC007786.3-201ENST00000615154 596 ntBASIC4.78□□□□□ -1.64
CXCL12P48061 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CXCL12P48061 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.78□□□□□ -1.64
CXCL12P48061 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.78□□□□□ -1.64
CXCL12P48061 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.78□□□□□ -1.64
CXCL12P48061 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CXCL12P48061 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CXCL12P48061 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.78□□□□□ -1.64
CXCL12P48061 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.78□□□□□ -1.64
CXCL12P48061 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.78□□□□□ -1.64
CXCL12P48061 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CXCL12P48061 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CXCL12P48061 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.78□□□□□ -1.64
CXCL12P48061 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CXCL12P48061 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CXCL12P48061 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CXCL12P48061 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
CXCL12P48061 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CXCL12P48061 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL12P48061 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CXCL12P48061 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL12P48061 SMG1P6-201ENST00000532337 2930 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 AC010266.2-201ENST00000564741 3255 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL12P48061 AL355488.2-201ENST00000609909 2850 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL12P48061 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL12P48061 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL12P48061 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 AC025750.1-201ENST00000399891 379 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.77□□□□□ -1.65
CXCL12P48061 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.77□□□□□ -1.65
CXCL12P48061 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.77□□□□□ -1.65
CXCL12P48061 AC097523.2-201ENST00000435551 652 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 AC044797.1-201ENST00000445744 679 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 H2AFZP5-201ENST00000446960 382 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.77□□□□□ -1.65
CXCL12P48061 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 RN7SL303P-201ENST00000469773 251 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 RN7SL558P-201ENST00000497468 299 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.77□□□□□ -1.65
CXCL12P48061 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.77□□□□□ -1.65
CXCL12P48061 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.77□□□□□ -1.65
CXCL12P48061 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.77□□□□□ -1.65
CXCL12P48061 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL12P48061 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL12P48061 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.77□□□□□ -1.65
CXCL12P48061 AC090948.1-201ENST00000607464 549 ntBASIC4.77□□□□□ -1.65
CXCL12P48061 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
CXCL12P48061 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL12P48061 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.77□□□□□ -1.65
CXCL12P48061 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL12P48061 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL12P48061 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CXCL12P48061 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL12P48061 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CXCL12P48061 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.76□□□□□ -1.65
CXCL12P48061 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.76□□□□□ -1.65
CXCL12P48061 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CXCL12P48061 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 PEX12P1-201ENST00000400284 1048 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AMZ2P2-201ENST00000406819 1057 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 QRSL1P2-201ENST00000418582 964 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL12P48061 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 AL356387.2-201ENST00000422272 243 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AL645608.4-201ENST00000423619 154 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AC099670.2-201ENST00000435130 321 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AC046176.1-201ENST00000435260 1170 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL12P48061 FHP1-201ENST00000442741 703 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 NUTF2P3-201ENST00000448540 384 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.76□□□□□ -1.65
CXCL12P48061 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL12P48061 MTND5P12-201ENST00000502851 1449 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL12P48061 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.76□□□□□ -1.65
CXCL12P48061 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL12P48061 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.76□□□□□ -1.65
CXCL12P48061 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.76□□□□□ -1.65
CXCL12P48061 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.76□□□□□ -1.65
CXCL12P48061 RN7SL290P-201ENST00000578661 300 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AC011477.5-201ENST00000586571 259 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL12P48061 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
CXCL12P48061 AC115286.1-201ENST00000604298 434 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 ARF4P1-201ENST00000605447 541 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AC018695.5-201ENST00000605872 315 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AC091979.2-201ENST00000607514 214 ntBASIC4.76□□□□□ -1.65
CXCL12P48061 AC104118.1-201ENST00000607625 1589 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms