Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HTTP42858 ZNF833P-201ENST00000424938 1494 ntBASIC4.92□□□□□ -1.62
HTTP42858 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.92□□□□□ -1.62
HTTP42858 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HTTP42858 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HTTP42858 SNORA5A-201ENST00000384111 134 ntBASIC4.92□□□□□ -1.62
HTTP42858 PAICSP4-201ENST00000517543 1253 ntBASIC4.92□□□□□ -1.62
HTTP42858 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.92□□□□□ -1.62
HTTP42858 AC015912.2-201ENST00000571053 181 ntBASIC4.92□□□□□ -1.62
HTTP42858 AC022146.1-201ENST00000595307 847 ntBASIC4.92□□□□□ -1.62
HTTP42858 AC007786.3-201ENST00000615154 596 ntBASIC4.92□□□□□ -1.62
HTTP42858 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.92□□□□□ -1.62
HTTP42858 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC4.92□□□□□ -1.62
HTTP42858 AC092451.3-201ENST00000625067 1343 ntBASIC4.92□□□□□ -1.62
HTTP42858 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HTTP42858 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HTTP42858 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HTTP42858 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HTTP42858 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HTTP42858 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.92□□□□□ -1.62
HTTP42858 RNU1-14P-201ENST00000362759 152 ntBASIC4.92□□□□□ -1.62
HTTP42858 AL590704.1-201ENST00000402856 794 ntBASIC4.92□□□□□ -1.62
HTTP42858 AL157831.1-201ENST00000426134 473 ntBASIC4.92□□□□□ -1.62
HTTP42858 BX276092.6-201ENST00000430476 250 ntBASIC4.92□□□□□ -1.62
HTTP42858 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.92□□□□□ -1.62
HTTP42858 BX276092.8-201ENST00000455722 250 ntBASIC4.92□□□□□ -1.62
HTTP42858 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.92□□□□□ -1.62
HTTP42858 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.92□□□□□ -1.62
HTTP42858 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.92□□□□□ -1.62
HTTP42858 AC010487.1-201ENST00000594408 1172 ntBASIC4.92□□□□□ -1.62
HTTP42858 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.92□□□□□ -1.62
HTTP42858 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HTTP42858 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.92□□□□□ -1.62
HTTP42858 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC4.91□□□□□ -1.62
HTTP42858 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC4.91□□□□□ -1.62
HTTP42858 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HTTP42858 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC4.91□□□□□ -1.62
HTTP42858 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HTTP42858 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HTTP42858 MIR34B-201ENST00000385076 84 ntBASIC4.91□□□□□ -1.62
HTTP42858 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.91□□□□□ -1.62
HTTP42858 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.91□□□□□ -1.62
HTTP42858 AC098799.3-201ENST00000506095 438 ntBASIC4.91□□□□□ -1.62
HTTP42858 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.91□□□□□ -1.62
HTTP42858 AC016559.2-201ENST00000510759 359 ntBASIC4.91□□□□□ -1.62
HTTP42858 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.91□□□□□ -1.62
HTTP42858 PRPF19P1-201ENST00000584766 898 ntBASIC4.91□□□□□ -1.62
HTTP42858 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.91□□□□□ -1.62
HTTP42858 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HTTP42858 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HTTP42858 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HTTP42858 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HTTP42858 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HTTP42858 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.91□□□□□ -1.62
HTTP42858 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.91□□□□□ -1.62
HTTP42858 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HTTP42858 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HTTP42858 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HTTP42858 MIR6500-201ENST00000622700 86 ntBASIC4.91□□□□□ -1.62
HTTP42858 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC4.91□□□□□ -1.62
HTTP42858 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.91□□□□□ -1.62
HTTP42858 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
HTTP42858 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC4.91□□□□□ -1.62
HTTP42858 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.9□□□□□ -1.62
HTTP42858 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HTTP42858 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.9□□□□□ -1.62
HTTP42858 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HTTP42858 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.9□□□□□ -1.62
HTTP42858 KCTD9P2-201ENST00000512203 1013 ntBASIC4.9□□□□□ -1.62
HTTP42858 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.9□□□□□ -1.62
HTTP42858 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.9□□□□□ -1.62
HTTP42858 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HTTP42858 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HTTP42858 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
HTTP42858 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HTTP42858 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HTTP42858 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HTTP42858 AL450992.3-201ENST00000413192 568 ntBASIC4.9□□□□□ -1.63
HTTP42858 RPL7P49-201ENST00000471402 708 ntBASIC4.9□□□□□ -1.63
HTTP42858 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.9□□□□□ -1.63
HTTP42858 HSPE1P5-201ENST00000561489 272 ntBASIC4.9□□□□□ -1.63
HTTP42858 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.9□□□□□ -1.63
HTTP42858 MIR5685-201ENST00000579080 79 ntBASIC4.9□□□□□ -1.63
HTTP42858 AC005000.2-201ENST00000605468 310 ntBASIC4.9□□□□□ -1.63
HTTP42858 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.9□□□□□ -1.63
HTTP42858 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.9□□□□□ -1.63
HTTP42858 AL117378.2-201ENST00000622916 1337 ntBASIC4.9□□□□□ -1.63
HTTP42858 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HTTP42858 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HTTP42858 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HTTP42858 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HTTP42858 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.9□□□□□ -1.63
HTTP42858 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HTTP42858 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HTTP42858 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HTTP42858 AC008549.2-201ENST00000333482 706 ntBASIC4.9□□□□□ -1.63
HTTP42858 RPL21P17-201ENST00000397467 475 ntBASIC4.9□□□□□ -1.63
HTTP42858 PPIAP13-201ENST00000434706 478 ntBASIC4.9□□□□□ -1.63
HTTP42858 MTND2P40-201ENST00000436718 841 ntBASIC4.9□□□□□ -1.63
HTTP42858 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms