Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AC008966.2-201ENST00000606157 453 ntBASIC8.39□□□□□ -1.07
PTPREP23469 AC078899.5-201ENST00000612475 178 ntBASIC8.39□□□□□ -1.07
PTPREP23469 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPREP23469 AL359757.2-201ENST00000624309 274 ntBASIC8.39□□□□□ -1.07
PTPREP23469 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PTPREP23469 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPREP23469 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.39□□□□□ -1.07
PTPREP23469 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPREP23469 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 MTCO1P14-201ENST00000441695 1559 ntBASIC8.39□□□□□ -1.07
PTPREP23469 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 OR52K3P-202ENST00000641797 1729 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.38□□□□□ -1.07
PTPREP23469 RNU6-1339P-201ENST00000363574 91 ntBASIC8.38□□□□□ -1.07
PTPREP23469 Y_RNA.187-201ENST00000363918 113 ntBASIC8.38□□□□□ -1.07
PTPREP23469 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 NFIB-202ENST00000380924 840 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 AC245036.1-201ENST00000391727 309 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AC092642.1-201ENST00000392417 425 ntBASIC8.38□□□□□ -1.07
PTPREP23469 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
PTPREP23469 PDCL3P5-201ENST00000398028 722 ntBASIC8.38□□□□□ -1.07
PTPREP23469 SNORA3.1-201ENST00000408166 111 ntBASIC8.38□□□□□ -1.07
PTPREP23469 RN7SKP148-201ENST00000410179 275 ntBASIC8.38□□□□□ -1.07
PTPREP23469 HMGB3P2-201ENST00000411913 584 ntBASIC8.38□□□□□ -1.07
PTPREP23469 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC8.38□□□□□ -1.07
PTPREP23469 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 AL593856.1-201ENST00000419949 805 ntBASIC8.38□□□□□ -1.07
PTPREP23469 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 AC073335.1-201ENST00000427776 363 ntBASIC8.38□□□□□ -1.07
PTPREP23469 GAPDHP34-201ENST00000432112 823 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AC114755.4-201ENST00000439114 443 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AMYP1-201ENST00000440059 1023 ntBASIC8.38□□□□□ -1.07
PTPREP23469 RPL17P49-201ENST00000443728 411 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC8.38□□□□□ -1.07
PTPREP23469 AL606490.1-201ENST00000452266 765 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC8.38□□□□□ -1.07
PTPREP23469 AL645937.3-201ENST00000453647 936 ntBASIC8.38□□□□□ -1.07
PTPREP23469 MED28P7-201ENST00000456611 530 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC8.38□□□□□ -1.07
PTPREP23469 RN7SL868P-201ENST00000485915 303 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AC104564.1-201ENST00000493028 407 ntBASIC8.38□□□□□ -1.07
PTPREP23469 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 NPM1P41-201ENST00000512920 831 ntBASIC8.38□□□□□ -1.07
PTPREP23469 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 RNU6-764P-201ENST00000516396 105 ntBASIC8.38□□□□□ -1.07
PTPREP23469 RNU6-1308P-201ENST00000516817 103 ntBASIC8.38□□□□□ -1.07
PTPREP23469 IGLV1-62-201ENST00000518003 441 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC8.38□□□□□ -1.07
PTPREP23469 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 DEFB131D-201ENST00000526803 184 ntBASIC8.38□□□□□ -1.07
PTPREP23469 OR5F2P-201ENST00000532761 941 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AL135978.1-201ENST00000553618 1266 ntBASIC8.38□□□□□ -1.07
PTPREP23469 NDUFA3P4-201ENST00000560814 250 ntBASIC8.38□□□□□ -1.07
PTPREP23469 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC8.38□□□□□ -1.07
PTPREP23469 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 AC004696.1-201ENST00000614345 607 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 AC008115.3-201ENST00000614874 549 ntBASIC8.38□□□□□ -1.07
PTPREP23469 U6.107-201ENST00000637108 79 ntBASIC8.38□□□□□ -1.07
PTPREP23469 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.38□□□□□ -1.07
PTPREP23469 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 MFSD8-217ENST00000641178 4374 ntBASIC8.38□□□□□ -1.07
PTPREP23469 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.38□□□□□ -1.07
PTPREP23469 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PTPREP23469 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.37□□□□□ -1.07
PTPREP23469 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
PTPREP23469 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
PTPREP23469 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTPREP23469 OR5M2P-202ENST00000641241 4242 ntBASIC8.37□□□□□ -1.07
PTPREP23469 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.37□□□□□ -1.07
PTPREP23469 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms