Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQB2P05538 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 OR56B2P-201ENST00000317102 954 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 AL035419.1-201ENST00000397037 564 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 AL359643.1-201ENST00000404109 423 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 RN7SKP106-201ENST00000410832 272 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 USP9YP9-201ENST00000429406 715 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 AL935212.3-201ENST00000450729 284 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 RNA5SP103-201ENST00000459503 118 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 AC231760.1-201ENST00000498002 260 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 MTND4LP2-201ENST00000502312 285 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 RN7SKP46-201ENST00000515942 234 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 MIR4270-201ENST00000581799 70 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 AC004232.3-201ENST00000622977 525 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 AC126323.6-202ENST00000568092 3511 ntBASIC4.69□□□□□ -1.66
HLA-DQB2P05538 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQB2P05538 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 KARSP3-201ENST00000571212 1504 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AC020633.1-201ENST00000468439 2247 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AC021146.4-201ENST00000309229 279 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 MIR298-201ENST00000401212 88 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 Z98745.1-201ENST00000402553 494 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AC006466.1-201ENST00000438721 289 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 Z80107.2-201ENST00000445127 392 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 ISCUP1-201ENST00000454451 448 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 SCARNA10-201ENST00000459255 330 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AK4P6-201ENST00000505168 528 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 IGKV1-32-201ENST00000519290 311 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AC008147.3-201ENST00000548666 354 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 RN7SL690P-201ENST00000582087 240 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AC068790.7-201ENST00000602347 528 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DQB2P05538 ZNF137P-201ENST00000456718 1920 ntBASIC4.68□□□□□ -1.66
HLA-DQB2P05538 AP001642.1-201ENST00000624727 2117 ntBASIC4.67□□□□□ -1.66
HLA-DQB2P05538 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DQB2P05538 RN7SKP115-201ENST00000363177 317 ntBASIC4.67□□□□□ -1.66
HLA-DQB2P05538 RNVU1-6-201ENST00000364688 164 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms