Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 NPM1P6-201ENST00000521088 871 ntBASIC5.62□□□□□ -1.51
COL1A1P02452 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.62□□□□□ -1.51
COL1A1P02452 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.62□□□□□ -1.51
COL1A1P02452 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.62□□□□□ -1.51
COL1A1P02452 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.62□□□□□ -1.51
COL1A1P02452 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.62□□□□□ -1.51
COL1A1P02452 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
COL1A1P02452 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL1A1P02452 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL1A1P02452 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL1A1P02452 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
COL1A1P02452 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
COL1A1P02452 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.61□□□□□ -1.51
COL1A1P02452 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.61□□□□□ -1.51
COL1A1P02452 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.61□□□□□ -1.51
COL1A1P02452 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL1A1P02452 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
COL1A1P02452 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 ZNF402P-201ENST00000404435 3100 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.61□□□□□ -1.51
COL1A1P02452 AL731566.1-201ENST00000620490 1937 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 SALL4P2-201ENST00000423288 2910 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
COL1A1P02452 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.61□□□□□ -1.51
COL1A1P02452 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.61□□□□□ -1.51
COL1A1P02452 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.61□□□□□ -1.51
COL1A1P02452 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.61□□□□□ -1.51
COL1A1P02452 FHP1-201ENST00000442741 703 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 H2AFZP5-201ENST00000446960 382 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 SCARNA10-201ENST00000459255 330 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 AC090142.1-201ENST00000465776 462 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.61□□□□□ -1.51
COL1A1P02452 AC104763.1-201ENST00000475274 360 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 AC026402.1-201ENST00000513642 170 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.61□□□□□ -1.51
COL1A1P02452 AP000619.2-201ENST00000546014 969 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.61□□□□□ -1.51
COL1A1P02452 MIR3939-201ENST00000582614 106 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.61□□□□□ -1.51
COL1A1P02452 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.61□□□□□ -1.51
COL1A1P02452 AC090948.1-201ENST00000607464 549 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.61□□□□□ -1.51
COL1A1P02452 OR8G7P-201ENST00000616658 848 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 AC015804.1-201ENST00000622935 435 ntBASIC5.61□□□□□ -1.51
COL1A1P02452 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.61□□□□□ -1.51
COL1A1P02452 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL1A1P02452 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.61□□□□□ -1.51
COL1A1P02452 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.61□□□□□ -1.51
COL1A1P02452 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL1A1P02452 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL1A1P02452 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL1A1P02452 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.6□□□□□ -1.51
COL1A1P02452 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.6□□□□□ -1.51
COL1A1P02452 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
COL1A1P02452 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL1A1P02452 RNA5SP388-201ENST00000362584 119 ntBASIC5.6□□□□□ -1.51
COL1A1P02452 AP000580.1-201ENST00000404439 358 ntBASIC5.6□□□□□ -1.51
COL1A1P02452 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.6□□□□□ -1.51
COL1A1P02452 RPS27AP12-201ENST00000429552 465 ntBASIC5.6□□□□□ -1.51
COL1A1P02452 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.6□□□□□ -1.51
COL1A1P02452 NDUFA5P1-201ENST00000433858 341 ntBASIC5.6□□□□□ -1.51
COL1A1P02452 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.6□□□□□ -1.51
COL1A1P02452 AC015912.2-201ENST00000571053 181 ntBASIC5.6□□□□□ -1.51
COL1A1P02452 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.6□□□□□ -1.51
COL1A1P02452 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.6□□□□□ -1.51
COL1A1P02452 AC067959.1-201ENST00000604334 379 ntBASIC5.6□□□□□ -1.51
COL1A1P02452 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL1A1P02452 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL1A1P02452 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.6□□□□□ -1.51
COL1A1P02452 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL1A1P02452 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL1A1P02452 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL1A1P02452 RNA5SP28-201ENST00000363841 119 ntBASIC5.59□□□□□ -1.51
COL1A1P02452 RPL23AP59-201ENST00000399415 461 ntBASIC5.59□□□□□ -1.51
COL1A1P02452 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL1A1P02452 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.59□□□□□ -1.51
COL1A1P02452 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.59□□□□□ -1.51
COL1A1P02452 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.59□□□□□ -1.51
COL1A1P02452 AL356387.2-201ENST00000422272 243 ntBASIC5.59□□□□□ -1.51
COL1A1P02452 EIF4HP2-201ENST00000424380 563 ntBASIC5.59□□□□□ -1.51
COL1A1P02452 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL1A1P02452 RPL21P126-201ENST00000470049 478 ntBASIC5.59□□□□□ -1.51
COL1A1P02452 AC090686.1-201ENST00000481577 749 ntBASIC5.59□□□□□ -1.51
COL1A1P02452 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL1A1P02452 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.59□□□□□ -1.51
COL1A1P02452 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.59□□□□□ -1.51
COL1A1P02452 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.59□□□□□ -1.51
COL1A1P02452 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.59□□□□□ -1.51
COL1A1P02452 AL133243.1-201ENST00000614487 366 ntBASIC5.59□□□□□ -1.51
COL1A1P02452 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL1A1P02452 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms