Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
RAPGEF3O95398 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RAPGEF3O95398 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.52□□□□□ -1.21
RAPGEF3O95398 AC079298.1-201ENST00000625026 1619 ntBASIC7.52□□□□□ -1.21
RAPGEF3O95398 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RAPGEF3O95398 CASC19-243ENST00000641588 1546 ntBASIC7.52□□□□□ -1.21
RAPGEF3O95398 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RAPGEF3O95398 AC010329.1-201ENST00000593903 8328 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 NCLP2-201ENST00000416078 1462 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RAPGEF3O95398 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RAPGEF3O95398 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 RNU6-792P-201ENST00000363490 107 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 RNA5SP509-201ENST00000364577 119 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RAPGEF3O95398 MIR122-201ENST00000385044 85 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 ATP5HP3-201ENST00000396994 486 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 RAB9AP4-201ENST00000415230 609 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RAPGEF3O95398 EEF1A1P1-201ENST00000447052 739 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 IGKV3OR22-2-201ENST00000517943 313 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 PRELID3BP3-201ENST00000584963 545 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 MIR3138-201ENST00000585238 82 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC060780.2-201ENST00000589047 198 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC108738.1-201ENST00000603703 237 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC015849.2-201ENST00000605738 409 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RAPGEF3O95398 uc_338.7-201ENST00000621834 124 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC004808.1-201ENST00000627671 721 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC099654.9-201ENST00000637055 678 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RAPGEF3O95398 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RAPGEF3O95398 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RAPGEF3O95398 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RAPGEF3O95398 AC017002.4-201ENST00000604721 1525 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RAPGEF3O95398 AL669831.5-218ENST00000591702 1873 ntBASIC7.51□□□□□ -1.21
RAPGEF3O95398 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
RAPGEF3O95398 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RAPGEF3O95398 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RAPGEF3O95398 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RAPGEF3O95398 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RAPGEF3O95398 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.5□□□□□ -1.21
RAPGEF3O95398 U3.30-201ENST00000391308 210 ntBASIC7.5□□□□□ -1.21
RAPGEF3O95398 SNORA11C-201ENST00000408532 129 ntBASIC7.5□□□□□ -1.21
RAPGEF3O95398 AL606490.7-201ENST00000433136 191 ntBASIC7.5□□□□□ -1.21
RAPGEF3O95398 AL390879.1-201ENST00000439143 386 ntBASIC7.5□□□□□ -1.21
RAPGEF3O95398 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 AK4P6-201ENST00000505168 528 ntBASIC7.5□□□□□ -1.21
RAPGEF3O95398 MTCO1P35-201ENST00000515270 228 ntBASIC7.5□□□□□ -1.21
RAPGEF3O95398 RNU6-334P-201ENST00000517072 102 ntBASIC7.5□□□□□ -1.21
RAPGEF3O95398 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 RN7SL339P-201ENST00000580597 296 ntBASIC7.5□□□□□ -1.21
RAPGEF3O95398 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 AC007497.1-201ENST00000610421 561 ntBASIC7.5□□□□□ -1.21
RAPGEF3O95398 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RAPGEF3O95398 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC7.5□□□□□ -1.21
RAPGEF3O95398 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RAPGEF3O95398 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
RAPGEF3O95398 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
RAPGEF3O95398 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
RAPGEF3O95398 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RAPGEF3O95398 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RAPGEF3O95398 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC7.49□□□□□ -1.21
RAPGEF3O95398 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.49□□□□□ -1.21
RAPGEF3O95398 U3.10-201ENST00000364459 214 ntBASIC7.49□□□□□ -1.21
RAPGEF3O95398 SNORA2.3-201ENST00000383920 135 ntBASIC7.49□□□□□ -1.21
RAPGEF3O95398 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.49□□□□□ -1.21
RAPGEF3O95398 LINC01881-201ENST00000416103 412 ntBASIC7.49□□□□□ -1.21
RAPGEF3O95398 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC7.49□□□□□ -1.21
RAPGEF3O95398 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC7.49□□□□□ -1.21
RAPGEF3O95398 MTCO2P1-201ENST00000424648 477 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms