Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TO15178 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TO15178 AC021242.1-201ENST00000507315 2035 ntBASIC4.9□□□□□ -1.62
TO15178 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.9□□□□□ -1.62
TO15178 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TO15178 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.9□□□□□ -1.62
TO15178 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
TO15178 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TO15178 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TO15178 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TO15178 OR9G4-201ENST00000302957 984 ntBASIC4.9□□□□□ -1.63
TO15178 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TO15178 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TO15178 RNU1-149P-201ENST00000390870 161 ntBASIC4.9□□□□□ -1.63
TO15178 RNU6-1176P-201ENST00000390955 107 ntBASIC4.9□□□□□ -1.63
TO15178 ATP5HP3-201ENST00000396994 486 ntBASIC4.9□□□□□ -1.63
TO15178 RN7SKP247-201ENST00000411094 308 ntBASIC4.9□□□□□ -1.63
TO15178 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.9□□□□□ -1.63
TO15178 RPL6P29-201ENST00000414863 865 ntBASIC4.9□□□□□ -1.63
TO15178 OR13Z1P-201ENST00000416141 834 ntBASIC4.9□□□□□ -1.63
TO15178 MTCO2P1-201ENST00000424648 477 ntBASIC4.9□□□□□ -1.63
TO15178 AC108075.1-201ENST00000424692 529 ntBASIC4.9□□□□□ -1.63
TO15178 AL512637.2-201ENST00000431287 1256 ntBASIC4.9□□□□□ -1.63
TO15178 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.9□□□□□ -1.63
TO15178 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.9□□□□□ -1.63
TO15178 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.9□□□□□ -1.63
TO15178 AC104634.1-201ENST00000452720 462 ntBASIC4.9□□□□□ -1.63
TO15178 RPS21P4-201ENST00000487122 248 ntBASIC4.9□□□□□ -1.63
TO15178 AC024558.1-201ENST00000505008 528 ntBASIC4.9□□□□□ -1.63
TO15178 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.9□□□□□ -1.63
TO15178 RNU6-1308P-201ENST00000516817 103 ntBASIC4.9□□□□□ -1.63
TO15178 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.9□□□□□ -1.63
TO15178 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.9□□□□□ -1.63
TO15178 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TO15178 AC127381.1-201ENST00000555979 939 ntBASIC4.9□□□□□ -1.63
TO15178 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.9□□□□□ -1.63
TO15178 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.9□□□□□ -1.63
TO15178 AC122134.1-202ENST00000569111 1201 ntBASIC4.9□□□□□ -1.63
TO15178 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.9□□□□□ -1.63
TO15178 AC069307.1-201ENST00000602820 447 ntBASIC4.9□□□□□ -1.63
TO15178 BNIP3P31-201ENST00000604515 566 ntBASIC4.9□□□□□ -1.63
TO15178 AC009597.2-201ENST00000604659 592 ntBASIC4.9□□□□□ -1.63
TO15178 AL162431.4-201ENST00000604674 411 ntBASIC4.9□□□□□ -1.63
TO15178 MIR8084-201ENST00000614105 89 ntBASIC4.9□□□□□ -1.63
TO15178 AC018926.1-201ENST00000616335 435 ntBASIC4.9□□□□□ -1.63
TO15178 AC090527.3-201ENST00000619041 548 ntBASIC4.9□□□□□ -1.63
TO15178 AC145207.9-201ENST00000623802 325 ntBASIC4.9□□□□□ -1.63
TO15178 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
TO15178 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TO15178 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TO15178 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TO15178 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TO15178 SMG1P4-204ENST00000523028 4131 ntBASIC4.9□□□□□ -1.63
TO15178 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TO15178 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
TO15178 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
TO15178 ZNF733P-202ENST00000444809 1573 ntBASIC4.9□□□□□ -1.63
TO15178 AC104118.1-201ENST00000607625 1589 ntBASIC4.9□□□□□ -1.63
TO15178 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
TO15178 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TO15178 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TO15178 AC009313.2-201ENST00000417893 1941 ntBASIC4.89□□□□□ -1.63
TO15178 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.89□□□□□ -1.63
TO15178 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 MTCO1P11-201ENST00000429111 1528 ntBASIC4.89□□□□□ -1.63
TO15178 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 MIR16-2-201ENST00000362117 81 ntBASIC4.89□□□□□ -1.63
TO15178 SNORA51.1-201ENST00000363243 140 ntBASIC4.89□□□□□ -1.63
TO15178 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
TO15178 RNA5SP241-201ENST00000391326 114 ntBASIC4.89□□□□□ -1.63
TO15178 RNU4-74P-201ENST00000411280 161 ntBASIC4.89□□□□□ -1.63
TO15178 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.89□□□□□ -1.63
TO15178 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.89□□□□□ -1.63
TO15178 AL606495.1-201ENST00000422100 813 ntBASIC4.89□□□□□ -1.63
TO15178 AC099336.2-201ENST00000422457 254 ntBASIC4.89□□□□□ -1.63
TO15178 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.89□□□□□ -1.63
TO15178 HSFY7P-201ENST00000432672 318 ntBASIC4.89□□□□□ -1.63
TO15178 AL512661.1-201ENST00000434586 1253 ntBASIC4.89□□□□□ -1.63
TO15178 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.89□□□□□ -1.63
TO15178 HSFY8P-201ENST00000437934 318 ntBASIC4.89□□□□□ -1.63
TO15178 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 EIF4A1P11-201ENST00000451239 222 ntBASIC4.89□□□□□ -1.63
TO15178 HMGB1P5-202ENST00000451497 985 ntBASIC4.89□□□□□ -1.63
TO15178 HSFY5P-201ENST00000453726 309 ntBASIC4.89□□□□□ -1.63
TO15178 AC099560.2-201ENST00000457554 255 ntBASIC4.89□□□□□ -1.63
TO15178 PSMC1P13-201ENST00000458195 985 ntBASIC4.89□□□□□ -1.63
TO15178 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.89□□□□□ -1.63
TO15178 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.89□□□□□ -1.63
TO15178 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.89□□□□□ -1.63
TO15178 RPL15P21-201ENST00000495592 567 ntBASIC4.89□□□□□ -1.63
TO15178 RPSAP51-201ENST00000497462 645 ntBASIC4.89□□□□□ -1.63
TO15178 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.89□□□□□ -1.63
TO15178 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.89□□□□□ -1.63
TO15178 RN7SKP141-201ENST00000516167 338 ntBASIC4.89□□□□□ -1.63
TO15178 RNU6-334P-201ENST00000517072 102 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms