Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SPASTQ9UBP0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 CASC19-284ENST00000642142 1868 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 MAPK10-263ENST00000641052 4307 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 OR9G4-201ENST00000302957 984 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 RN7SKP115-201ENST00000363177 317 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 RNU1-74P-201ENST00000384108 171 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 DHFRP5-201ENST00000406944 564 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 COX5BP7-201ENST00000414780 274 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC104837.2-201ENST00000427236 424 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 MTND2P2-201ENST00000434633 945 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 CYCSP11-201ENST00000436426 315 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 RPL31P44-201ENST00000447680 377 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AL591623.2-201ENST00000449978 222 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 RPS3AP53-201ENST00000454716 778 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 RPL37AP8-201ENST00000494116 276 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 OR4V1P-201ENST00000525394 1140 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 LSM3P2-201ENST00000551246 273 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AP005131.7-201ENST00000610087 611 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 MIR6820-201ENST00000611508 62 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC091953.3-201ENST00000623220 236 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC112694.2-201ENST00000623697 768 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AP003499.2-201ENST00000624100 483 ntBASIC5.07□□□□□ -1.6
SPASTQ9UBP0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SPASTQ9UBP0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AC022417.1-201ENST00000624768 1303 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 Z97832.1-201ENST00000402490 328 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 RN7SKP114-201ENST00000410327 279 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 PCNPP4-201ENST00000414817 517 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 COX6B1P1-201ENST00000415962 213 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AC244453.4-201ENST00000419150 388 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 HSPD1P12-201ENST00000429127 1069 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 PRPF38AP2-201ENST00000438179 851 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 SCAND3P1-201ENST00000439854 1060 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AC021205.1-201ENST00000468797 348 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AC096741.1-201ENST00000472250 846 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 RPL7P41-201ENST00000485823 957 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 OR7E128P-201ENST00000532736 1024 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.06□□□□□ -1.6
SPASTQ9UBP0 AC040958.1-201ENST00000561102 201 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 MTCYBP13-201ENST00000578634 1093 ntBASIC5.06□□□□□ -1.6
SPASTQ9UBP0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms