Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AP004607.3-201ENST00000530354 3915 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 RNU1-87P-201ENST00000363727 170 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 RNU4-51P-201ENST00000364206 140 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 Y_RNA.578-201ENST00000390903 88 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 ANAPC10P1-201ENST00000395991 556 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AL357752.1-201ENST00000412817 349 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 BMS1P17-202ENST00000416720 316 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 MTND1P33-201ENST00000446251 917 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC073909.1-201ENST00000447112 999 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 FRG2FP-204ENST00000453982 852 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC026348.1-201ENST00000462549 1053 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 RPL32P33-201ENST00000487023 394 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 COX6B1P2-201ENST00000489624 230 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 IGBP1P5-201ENST00000507524 1000 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 RN7SKP283-201ENST00000517197 270 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC021678.3-201ENST00000517893 476 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC008429.4-201ENST00000521201 182 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC002487.1-201ENST00000604565 994 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC104695.2-201ENST00000605056 775 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AL021707.7-201ENST00000607991 416 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC106052.1-201ENST00000608029 497 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRFN1Q9P244 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.31□□□□□ -1.56
LRFN1Q9P244 PHKBP1-201ENST00000450951 1951 ntBASIC5.31□□□□□ -1.56
LRFN1Q9P244 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC138393.1-206ENST00000540997 1886 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AL353743.4-201ENST00000422653 1547 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 SNORA64.1-201ENST00000362600 132 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 OR3A2-201ENST00000408891 1076 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 RNU6-603P-201ENST00000411403 107 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC234782.4-201ENST00000417646 1048 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AL009174.1-201ENST00000426577 416 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 MTND2P5-201ENST00000432656 1006 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 RPL21P110-201ENST00000433345 446 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 BX679664.2-201ENST00000439282 283 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC005297.1-201ENST00000444765 862 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AL591363.1-201ENST00000450091 483 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AL445687.2-201ENST00000458156 728 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC020898.1-201ENST00000474167 787 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AL035690.1-201ENST00000490892 383 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC009120.1-201ENST00000493458 473 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 EIF3LP3-201ENST00000495197 822 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 RN7SL466P-201ENST00000497546 295 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 RNU6-416P-201ENST00000516265 103 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms