Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 Y_RNA.97-201ENST00000363094 102 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 RNU6-1322P-201ENST00000364309 107 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 MIR130B-202ENST00000385018 82 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC025750.1-201ENST00000399891 379 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 MTND3P8-201ENST00000412909 339 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AL807761.1-201ENST00000417622 171 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 BEND7P1-201ENST00000422058 457 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC008753.1-201ENST00000423096 284 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 SUMO2P10-201ENST00000452006 288 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC234771.3-201ENST00000454984 622 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 BTF3P15-201ENST00000455606 336 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 HMGN2P26-201ENST00000463169 339 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 RN7SL329P-201ENST00000467740 299 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC063943.2-201ENST00000495697 534 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 SNRPCP6-201ENST00000528310 210 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC007537.1-201ENST00000539347 327 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC068714.1-201ENST00000559623 800 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 NIFKP8-201ENST00000560500 874 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC011840.5-201ENST00000582125 771 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 MIR4701-201ENST00000583094 63 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 Z84480.1-201ENST00000605131 311 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AL390240.1-201ENST00000612950 384 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC110994.2-201ENST00000635481 492 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AC138207.6-201ENST00000579164 1967 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 LINC01963-201ENST00000562038 3148 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AL162171.3-201ENST00000617439 3178 ntBASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC6.98□□□□□ -1.29
COL25A1Q9BXS0 AL035555.1-201ENST00000404462 1790 ntBASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 AL031985.3-201ENST00000565390 2449 ntBASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 Y_RNA.47-201ENST00000362697 108 ntBASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 RNU6-31P-201ENST00000384388 108 ntBASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 U3.43-201ENST00000410734 213 ntBASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 SDHDP6-201ENST00000414693 480 ntBASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 CYCSP11-201ENST00000436426 315 ntBASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 CFL1P4-201ENST00000451536 498 ntBASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 AZGP1P2-201ENST00000454506 345 ntBASIC6.97□□□□□ -1.29
COL25A1Q9BXS0 RPL12P30-201ENST00000488389 499 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms