Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 RNU6-673P-201ENST00000365084 104 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 MIR298-201ENST00000401212 88 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 RPS27AP7-201ENST00000422792 455 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 CKS1BP6-201ENST00000424932 240 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 AC111000.3-201ENST00000508057 576 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 HPRT1P1-201ENST00000509498 657 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 AC138938.1-201ENST00000515431 782 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 MIR4284-201ENST00000578924 81 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 AL022401.1-201ENST00000619498 108 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 AC243960.7-201ENST00000623532 707 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 AC008758.3-201ENST00000507003 1829 ntBASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPAP1Q9BWH6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 U3.30-201ENST00000391308 210 ntBASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AL357515.1-201ENST00000402967 542 ntBASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 RPS26P4-201ENST00000431743 355 ntBASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AC093166.2-201ENST00000455969 1017 ntBASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 RN7SKP276-201ENST00000516242 268 ntBASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 RNA5SP464-201ENST00000516251 108 ntBASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 CYCSP40-201ENST00000575927 294 ntBASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AC010928.1-201ENST00000592477 1447 ntBASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.85□□□□□ -1.47
RPAP1Q9BWH6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AL449283.1-201ENST00000602631 3403 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AC008549.2-201ENST00000333482 706 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AC068538.1-201ENST00000376856 336 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 SNORA70F-201ENST00000384142 135 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AC068287.1-201ENST00000430283 295 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 CYCSP11-201ENST00000436426 315 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AC010326.1-201ENST00000462726 602 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 STRADBP1-201ENST00000478954 1281 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AL110118.1-201ENST00000553543 400 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AC136624.4-201ENST00000573044 370 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 DPRXP4-201ENST00000578053 568 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AP005262.1-201ENST00000582646 997 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AP000919.1-201ENST00000582850 985 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AL353684.1-201ENST00000622677 1120 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 MAPK10-263ENST00000641052 4307 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 SALL4P2-201ENST00000423288 2910 ntBASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.84□□□□□ -1.47
RPAP1Q9BWH6 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.84□□□□□ -1.48
RPAP1Q9BWH6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms