Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VRK1Q99986 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VRK1Q99986 RNU4-4P-201ENST00000364588 130 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 Y_RNA.318-201ENST00000365131 97 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 SNORA51.12-201ENST00000384448 134 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 RNU6-757P-201ENST00000410334 100 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 RNA5SP198-201ENST00000410376 127 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 RN7SKP144-201ENST00000411108 279 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.41□□□□□ -1.54
VRK1Q99986 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK1Q99986 AC098592.1-201ENST00000419352 333 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 AC092651.1-201ENST00000426110 312 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC073069.1-201ENST00000428657 441 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK1Q99986 RPL7P4-203ENST00000430239 730 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 MTCO3P5-201ENST00000433620 714 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC007679.3-201ENST00000434035 414 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC094019.1-201ENST00000434678 472 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 RPL12P18-201ENST00000437175 325 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 GSTA7P-201ENST00000438425 448 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AL354941.1-201ENST00000438600 464 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 MTCYBP34-201ENST00000439552 670 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 UBE2D3P4-201ENST00000441973 436 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 RPS10P18-201ENST00000442662 495 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 EEF1B2P5-201ENST00000444820 548 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK1Q99986 MTCYBP3-201ENST00000445588 1137 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 YWHAQP9-201ENST00000445891 512 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.41□□□□□ -1.54
VRK1Q99986 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 RPL23AP71-201ENST00000470966 469 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 RN7SL643P-201ENST00000471845 291 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.41□□□□□ -1.54
VRK1Q99986 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.41□□□□□ -1.54
VRK1Q99986 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.41□□□□□ -1.54
VRK1Q99986 IGBP1P5-201ENST00000507524 1000 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC111000.2-201ENST00000507775 550 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK1Q99986 AC109445.1-201ENST00000512356 383 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 RNU6-232P-201ENST00000517144 64 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC087808.1-201ENST00000520501 361 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VRK1Q99986 COX6B1P6-201ENST00000522347 255 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 AC005832.3-201ENST00000537929 631 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VRK1Q99986 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VRK1Q99986 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.41□□□□□ -1.54
VRK1Q99986 MRPS21P8-201ENST00000569196 235 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 MIR4999-201ENST00000585029 91 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 VN1R84P-201ENST00000593697 235 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC009220.3-201ENST00000604318 586 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC124916.2-201ENST00000604416 224 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AP004247.3-201ENST00000608682 624 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC092140.2-201ENST00000618027 521 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 AC015726.3-201ENST00000624501 418 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VRK1Q99986 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 ATE1-AS1-202ENST00000636460 506 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VRK1Q99986 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VRK1Q99986 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
VRK1Q99986 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK1Q99986 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.41□□□□□ -1.54
VRK1Q99986 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VRK1Q99986 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK1Q99986 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK1Q99986 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
VRK1Q99986 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VRK1Q99986 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VRK1Q99986 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VRK1Q99986 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK1Q99986 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VRK1Q99986 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
VRK1Q99986 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VRK1Q99986 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VRK1Q99986 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VRK1Q99986 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms