Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC008758.3-201ENST00000507003 1829 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 MT-RNR1-201ENST00000389680 954 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 MIR1289-1-201ENST00000408836 144 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 TCEA1P4-201ENST00000415066 844 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 TBCAP2-201ENST00000416175 326 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 HMGN2P31-201ENST00000432430 273 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC104978.1-201ENST00000449387 391 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC091868.1-201ENST00000508746 304 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 TRMT10BP1-201ENST00000519377 943 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC024224.1-201ENST00000538284 609 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC022884.2-201ENST00000578535 580 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC108359.1-201ENST00000616451 1211 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AC108467.2-201ENST00000617640 1597 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 RPS29P7-201ENST00000439662 171 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 OR7E10P-201ENST00000526420 991 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 AP003497.2-201ENST00000624220 967 ntBASIC3.86□□□□□ -1.79
CSMD1Q96PZ7 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AL929601.4-201ENST00000613011 1341 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 SYF2P2-201ENST00000417620 583 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AC009238.2-201ENST00000431026 355 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 RPL21P12-201ENST00000559810 515 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 MIMT1-201ENST00000597105 1050 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 MTND4LP31-201ENST00000514859 294 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AC069061.3-201ENST00000582254 823 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 RNU4-89P-201ENST00000607443 133 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AC019206.1-201ENST00000621938 425 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 SNX18P3-202ENST00000565670 1750 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AC006042.3-201ENST00000454684 1469 ntBASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC3.85□□□□□ -1.79
CSMD1Q96PZ7 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 RN7SKP267-201ENST00000410381 285 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 RPL7P49-201ENST00000471402 708 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 AC112230.1-201ENST00000604342 547 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 HNRNPA1P54-201ENST00000411857 9714 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 AC009951.1-201ENST00000623674 2614 ntBASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CSMD1Q96PZ7 TMSB10P2-201ENST00000416049 131 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms