Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 HMGN1P20-201ENST00000411849 300 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 OR6E1P-201ENST00000414424 923 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 MTCO3P4-201ENST00000419236 787 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 MARK2P12-201ENST00000420129 585 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AL590609.2-201ENST00000421430 368 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 NAP1L4P2-201ENST00000425958 899 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 FO393419.3-201ENST00000428741 282 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 RPL17P35-201ENST00000432217 549 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 MED6P1-201ENST00000439659 713 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC092685.1-201ENST00000447960 1243 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 EIF4A1P11-201ENST00000451239 222 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC104634.1-201ENST00000452720 462 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 DNAJB5P1-201ENST00000454004 806 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 NRBF2P4-201ENST00000520874 850 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 CIR1P1-201ENST00000524055 1133 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC005363.1-201ENST00000530779 351 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AL049872.1-201ENST00000556323 322 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 RN7SL708P-201ENST00000580952 299 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AL138895.2-201ENST00000603019 178 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AP006248.3-201ENST00000623580 594 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AC097372.4-201ENST00000625025 466 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 CASC19-221ENST00000641309 1382 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AP001002.1-201ENST00000625148 1513 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VPS33AQ96AX1 AL118496.1-201ENST00000440201 1812 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 MTND5P11-201ENST00000511037 1812 ntBASIC5.02□□□□□ -1.61
VPS33AQ96AX1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 MAPK10-349ENST00000641767 3661 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 IGKV7-3-201ENST00000357453 298 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 UBBP2-201ENST00000376781 231 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 RNU2-72P-201ENST00000411175 163 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 GSTM3P2-201ENST00000412746 530 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC019070.1-201ENST00000415008 1024 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 Z93019.1-201ENST00000416450 973 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 CLUHP1-201ENST00000435012 1190 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 GAPDHP58-201ENST00000438477 1006 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 RPS27P5-201ENST00000444247 244 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC097499.1-201ENST00000444277 208 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC105399.1-202ENST00000447303 205 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 RN7SL189P-201ENST00000468631 289 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC008628.1-201ENST00000508663 265 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 CYCSP22-201ENST00000517555 339 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AP002812.4-201ENST00000532139 286 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms