Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC092162.1-201ENST00000432828 434 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 RPS20P1-201ENST00000434853 354 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 CASP3P1-201ENST00000446037 609 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 KNOP1P3-201ENST00000446933 426 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC099560.2-201ENST00000457554 255 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC018638.3-201ENST00000461273 132 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC097484.1-201ENST00000471148 389 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 RN7SL222P-201ENST00000476452 299 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 COX6B1P5-201ENST00000509843 249 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 OR7E128P-201ENST00000532736 1024 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC087477.6-201ENST00000559595 843 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC090948.2-201ENST00000607363 564 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AL023881.1-201ENST00000621088 301 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 LINC01109-201ENST00000603837 3081 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 PABPC1P6-201ENST00000445594 1829 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 BX005019.1-201ENST00000561881 1810 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 DDX18P5-201ENST00000534547 1306 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AL592182.3-201ENST00000642132 3304 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 MIR1286-201ENST00000408112 78 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 TBCAP2-201ENST00000416175 326 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 DDX39BP1-205ENST00000422507 192 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AL158073.1-201ENST00000426848 1104 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 OR7E125P-201ENST00000443450 846 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 RN7SL172P-201ENST00000460535 303 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 COPS8P2-201ENST00000473228 627 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 HIGD1AP14-201ENST00000507617 282 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 BTG4P1-201ENST00000510421 183 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC004825.1-201ENST00000555068 586 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AL022401.1-201ENST00000619498 108 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC022106.2-201ENST00000620114 757 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC012414.7-202ENST00000622705 1090 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 CR383656.5-201ENST00000547616 1340 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AL451142.2-201ENST00000429076 2090 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AL121950.1-201ENST00000624993 2077 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 AC007996.1-201ENST00000620414 2821 ntBASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CLHC1Q8NHS4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 RPL23P2-201ENST00000320371 421 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AC008549.2-201ENST00000333482 706 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 ATP5F1P2-201ENST00000398143 760 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AL136116.2-201ENST00000404020 785 ntBASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.67□□□□□ -1.66
CLHC1Q8NHS4 E2F6P2-201ENST00000420708 748 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms