Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 AP001157.1-201ENST00000550837 2339 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HSPG2P98160 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 RPL23AP43-201ENST00000446445 471 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 ATP5G1P3-201ENST00000463301 410 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 HSPD1P15-201ENST00000505573 1122 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.8□□□□□ -1.96
HSPG2P98160 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC2.8□□□□□ -1.96
HSPG2P98160 PRELID3BP3-201ENST00000584963 545 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
HSPG2P98160 CASC19-204ENST00000641001 2055 ntBASIC2.8□□□□□ -1.96
HSPG2P98160 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
HSPG2P98160 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC2.8□□□□□ -1.96
HSPG2P98160 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
HSPG2P98160 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HSPG2P98160 KRR1P1-201ENST00000419430 803 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 PPIAP13-201ENST00000434706 478 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.79□□□□□ -1.96
HSPG2P98160 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.79□□□□□ -1.96
HSPG2P98160 EIF2S2P5-201ENST00000457635 968 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 AC093591.2-201ENST00000565254 3843 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HSPG2P98160 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC2.79□□□□□ -1.96
HSPG2P98160 BX679664.2-201ENST00000439282 283 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 AL162151.2-201ENST00000448875 158 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.79□□□□□ -1.96
HSPG2P98160 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.79□□□□□ -1.96
HSPG2P98160 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 AL161729.3-201ENST00000603533 673 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 AC243960.7-201ENST00000623532 707 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 TMEM30CP-203ENST00000637814 1035 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 ST7-221ENST00000465133 2155 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 AC004076.2-201ENST00000620532 3323 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 CCL7-202ENST00000394627 696 ntTSL 3 BASIC2.79□□□□□ -1.96
HSPG2P98160 OR8F1P-201ENST00000425243 930 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 AC090142.1-201ENST00000465776 462 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.79□□□□□ -1.96
HSPG2P98160 AC010487.1-201ENST00000594408 1172 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 LPP-208ENST00000448637 5835 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 ZNF833P-201ENST00000424938 1494 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HSPG2P98160 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC2.79□□□□□ -1.96
HSPG2P98160 QRSL1P2-201ENST00000418582 964 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC2.79□□□□□ -1.96
HSPG2P98160 snoU13.29-201ENST00000459370 104 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC2.79□□□□□ -1.96
HSPG2P98160 AC027369.5-201ENST00000533838 755 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 AC099669.2-201ENST00000616549 437 ntBASIC2.79□□□□□ -1.96
HSPG2P98160 AC009120.7-201ENST00000623452 780 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms