Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AC107993.1-201ENST00000591343 684 ntBASIC6.63□□□□□ -1.35
RTP1P59025 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.63□□□□□ -1.35
RTP1P59025 AC092653.1-201ENST00000608509 531 ntBASIC6.63□□□□□ -1.35
RTP1P59025 VN1R7P-201ENST00000619242 903 ntBASIC6.63□□□□□ -1.35
RTP1P59025 AC007494.3-201ENST00000624660 743 ntBASIC6.63□□□□□ -1.35
RTP1P59025 CASC19-248ENST00000641674 1356 ntBASIC6.63□□□□□ -1.35
RTP1P59025 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RTP1P59025 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
RTP1P59025 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.63□□□□□ -1.35
RTP1P59025 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RTP1P59025 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.63□□□□□ -1.35
RTP1P59025 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RTP1P59025 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.62□□□□□ -1.35
RTP1P59025 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RTP1P59025 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RTP1P59025 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RTP1P59025 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
RTP1P59025 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.62□□□□□ -1.35
RTP1P59025 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RTP1P59025 Y_RNA.3-201ENST00000362331 103 ntBASIC6.62□□□□□ -1.35
RTP1P59025 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.62□□□□□ -1.35
RTP1P59025 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
RTP1P59025 HMGB1P10-201ENST00000395823 563 ntBASIC6.62□□□□□ -1.35
RTP1P59025 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RTP1P59025 RPL7P58-201ENST00000402913 758 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 AC098592.2-201ENST00000413158 265 ntBASIC6.62□□□□□ -1.35
RTP1P59025 XKRYP4-201ENST00000414395 483 ntBASIC6.62□□□□□ -1.35
RTP1P59025 MTND1P23-201ENST00000416931 372 ntBASIC6.62□□□□□ -1.35
RTP1P59025 MTND1P32-201ENST00000433043 938 ntBASIC6.62□□□□□ -1.35
RTP1P59025 HMGB3P24-201ENST00000433260 622 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.62□□□□□ -1.35
RTP1P59025 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.62□□□□□ -1.35
RTP1P59025 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.62□□□□□ -1.35
RTP1P59025 MTCYBP3-201ENST00000445588 1137 ntBASIC6.62□□□□□ -1.35
RTP1P59025 XKRYP5-201ENST00000449659 483 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AL162739.1-201ENST00000450606 307 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AC233982.1-201ENST00000451247 436 ntBASIC6.62□□□□□ -1.35
RTP1P59025 SDC4P-201ENST00000453285 601 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.62□□□□□ -1.35
RTP1P59025 AC104164.1-201ENST00000460282 590 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AL355032.1-201ENST00000472981 438 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AC016687.1-201ENST00000482574 353 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.62□□□□□ -1.35
RTP1P59025 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.62□□□□□ -1.35
RTP1P59025 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.62□□□□□ -1.35
RTP1P59025 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.62□□□□□ -1.35
RTP1P59025 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RTP1P59025 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.62□□□□□ -1.35
RTP1P59025 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.62□□□□□ -1.35
RTP1P59025 OR4A6P-201ENST00000534364 970 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AP000619.2-201ENST00000546014 969 ntBASIC6.62□□□□□ -1.35
RTP1P59025 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RTP1P59025 IGBP1P1-201ENST00000554337 1009 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AL049779.3-201ENST00000557141 606 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.62□□□□□ -1.35
RTP1P59025 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.62□□□□□ -1.35
RTP1P59025 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 AC010547.7-201ENST00000570323 333 ntBASIC6.62□□□□□ -1.35
RTP1P59025 VN1R90P-201ENST00000595717 726 ntBASIC6.62□□□□□ -1.35
RTP1P59025 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 AC008115.3-201ENST00000614874 549 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AL162574.1-201ENST00000615702 950 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AC025588.4-201ENST00000615802 908 ntBASIC6.62□□□□□ -1.35
RTP1P59025 AL355974.3-201ENST00000617383 467 ntBASIC6.62□□□□□ -1.35
RTP1P59025 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RTP1P59025 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RTP1P59025 MTND5P24-201ENST00000438892 1767 ntBASIC6.62□□□□□ -1.35
RTP1P59025 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RTP1P59025 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.62□□□□□ -1.35
RTP1P59025 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RTP1P59025 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RTP1P59025 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RTP1P59025 THAP12P9-201ENST00000503971 2360 ntBASIC6.61□□□□□ -1.35
RTP1P59025 SGO1P2-201ENST00000429458 1589 ntBASIC6.61□□□□□ -1.35
RTP1P59025 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RTP1P59025 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.61□□□□□ -1.35
RTP1P59025 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
RTP1P59025 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RTP1P59025 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RTP1P59025 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RTP1P59025 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RTP1P59025 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RTP1P59025 AL929601.4-201ENST00000613011 1341 ntBASIC6.61□□□□□ -1.35
RTP1P59025 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
RTP1P59025 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RTP1P59025 RN7SKP115-201ENST00000363177 317 ntBASIC6.61□□□□□ -1.35
RTP1P59025 RNU6-867P-201ENST00000364956 107 ntBASIC6.61□□□□□ -1.35
RTP1P59025 RNA5SP211-201ENST00000365516 117 ntBASIC6.61□□□□□ -1.35
RTP1P59025 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RTP1P59025 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RTP1P59025 RNU6-932P-201ENST00000391108 106 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms