Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.37□□□□□ -1.55
CLRN1P58418 MTCO2P25-201ENST00000447065 681 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 FAR2P1-206ENST00000449736 709 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 HMGB1P7-201ENST00000450921 612 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AL606490.1-201ENST00000452266 765 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.37□□□□□ -1.55
CLRN1P58418 NCOR1P1-202ENST00000486162 291 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.37□□□□□ -1.55
CLRN1P58418 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 AC147055.4-201ENST00000504399 745 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.37□□□□□ -1.55
CLRN1P58418 Y_RNA.695-201ENST00000516715 107 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.37□□□□□ -1.55
CLRN1P58418 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.37□□□□□ -1.55
CLRN1P58418 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.37□□□□□ -1.55
CLRN1P58418 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.37□□□□□ -1.55
CLRN1P58418 AC012435.1-202ENST00000568772 240 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AC016839.1-201ENST00000578162 867 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AC011260.1-201ENST00000578420 472 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.37□□□□□ -1.55
CLRN1P58418 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.37□□□□□ -1.55
CLRN1P58418 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.37□□□□□ -1.55
CLRN1P58418 AC078795.2-201ENST00000602835 1252 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AC009220.3-201ENST00000604318 586 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AL592221.1-201ENST00000605266 382 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.37□□□□□ -1.55
CLRN1P58418 AL135786.2-201ENST00000608422 615 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AL352984.2-201ENST00000611153 546 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 uc_338.26-201ENST00000612659 160 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AL080312.2-201ENST00000613001 630 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 AL512652.1-201ENST00000619006 500 ntBASIC5.37□□□□□ -1.55
CLRN1P58418 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.37□□□□□ -1.55
CLRN1P58418 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.37□□□□□ -1.55
CLRN1P58418 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.37□□□□□ -1.55
CLRN1P58418 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLRN1P58418 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLRN1P58418 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
CLRN1P58418 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLRN1P58418 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLRN1P58418 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.37□□□□□ -1.55
CLRN1P58418 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CLRN1P58418 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLRN1P58418 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 IMMTP1-201ENST00000435590 2219 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CLRN1P58418 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 AC034229.2-201ENST00000566945 2508 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CLRN1P58418 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLRN1P58418 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 SNORD65.1-201ENST00000390889 71 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 SNORA26.8-201ENST00000391306 124 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 SNRPEP6-201ENST00000407465 277 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 SNORA77.2-201ENST00000408571 112 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 RN7SKP108-201ENST00000411367 328 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 MYL6P5-201ENST00000412707 459 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AL035422.1-201ENST00000414193 397 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.36□□□□□ -1.55
CLRN1P58418 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.36□□□□□ -1.55
CLRN1P58418 NMD3P2-201ENST00000421815 761 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 FAM183DP-201ENST00000421987 399 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 RPL7P44-201ENST00000424827 742 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 PRUNEP1-201ENST00000425846 705 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 MTCO1P54-201ENST00000430139 712 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 GAPDHP59-201ENST00000435908 267 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AL590399.4-201ENST00000436561 601 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 MTND2P40-201ENST00000436718 841 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 TRIM60P16-201ENST00000444048 694 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 FTLP8-201ENST00000446770 267 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.36□□□□□ -1.55
CLRN1P58418 RBMY2TP-201ENST00000451162 947 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.36□□□□□ -1.55
CLRN1P58418 TRBV8-2-201ENST00000475637 270 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.36□□□□□ -1.55
CLRN1P58418 DYNLL1P6-201ENST00000503440 264 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.36□□□□□ -1.55
CLRN1P58418 RN7SKP288-201ENST00000516227 268 ntBASIC5.36□□□□□ -1.55
CLRN1P58418 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.36□□□□□ -1.55
CLRN1P58418 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms