Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA13P31271 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA13P31271 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
HOXA13P31271 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA13P31271 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXA13P31271 AC013442.1-201ENST00000397347 228 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 RPL21P67-201ENST00000402896 478 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 MTCYBP7-201ENST00000419540 1134 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 AC007559.1-201ENST00000428736 355 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HOXA13P31271 AC000111.2-201ENST00000448200 210 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA13P31271 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXA13P31271 AURKAPS2-201ENST00000454983 333 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXA13P31271 EIF2S2P4-201ENST00000461070 984 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 AC007686.1-201ENST00000488511 463 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA13P31271 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXA13P31271 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HOXA13P31271 AP001880.2-201ENST00000538233 448 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXA13P31271 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXA13P31271 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA13P31271 AC040958.1-201ENST00000561102 201 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 LINC00557-201ENST00000563184 1279 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXA13P31271 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXA13P31271 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXA13P31271 AC040174.2-201ENST00000602701 465 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA13P31271 AL031658.2-201ENST00000616850 651 ntBASIC5.61□□□□□ -1.51
HOXA13P31271 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA13P31271 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
HOXA13P31271 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXA13P31271 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA13P31271 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXA13P31271 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA13P31271 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXA13P31271 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HOXA13P31271 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HOXA13P31271 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HOXA13P31271 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA13P31271 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA13P31271 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 SNORA73.1-201ENST00000363107 205 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 RNVU1-6-201ENST00000364688 164 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 PCNPP4-201ENST00000414817 517 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 RPL26P29-201ENST00000415623 438 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 QRSL1P2-201ENST00000418582 964 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 RPL5P2-201ENST00000429598 854 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 FABP7P2-201ENST00000429946 379 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA13P31271 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA13P31271 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA13P31271 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA13P31271 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
HOXA13P31271 RBMY2TP-201ENST00000451162 947 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA13P31271 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA13P31271 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA13P31271 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXA13P31271 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA13P31271 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HOXA13P31271 AC137768.1-201ENST00000549998 553 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA13P31271 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA13P31271 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXA13P31271 BMS1P7-201ENST00000602440 1052 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 AL136370.1-201ENST00000608166 691 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 AL158062.1-201ENST00000619632 745 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA13P31271 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA13P31271 FRG1EP-201ENST00000634469 770 ntBASIC5.6□□□□□ -1.51
HOXA13P31271 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA13P31271 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA13P31271 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXA13P31271 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXA13P31271 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA13P31271 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
HOXA13P31271 AC068446.1-201ENST00000556425 1549 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA13P31271 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA13P31271 RN7SKP115-201ENST00000363177 317 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA13P31271 SNORA56-201ENST00000383966 129 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 RNU6-1263P-201ENST00000384601 106 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 RNA5SP105-201ENST00000391123 113 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 GSTA12P-201ENST00000402398 508 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 DPPA2P2-201ENST00000418220 897 ntBASIC5.59□□□□□ -1.51
HOXA13P31271 PTP4A1P1-201ENST00000420539 515 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms