Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.03□□□□□ -1.44
COL6A2P12110 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 AC006115.2-201ENST00000596823 202 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AL136363.2-201ENST00000604173 851 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AL355974.3-201ENST00000617383 467 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 THAP12P9-201ENST00000503971 2360 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AC004158.1-201ENST00000564508 4319 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.03□□□□□ -1.44
COL6A2P12110 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.03□□□□□ -1.44
COL6A2P12110 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL6A2P12110 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 AC024587.1-201ENST00000505925 2157 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 CASC19-246ENST00000641625 1606 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.02□□□□□ -1.44
COL6A2P12110 AC217777.1-201ENST00000570034 1471 ntBASIC6.02□□□□□ -1.44
COL6A2P12110 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
COL6A2P12110 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL6A2P12110 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL6A2P12110 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.02□□□□□ -1.45
COL6A2P12110 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL6A2P12110 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.02□□□□□ -1.45
COL6A2P12110 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL6A2P12110 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL6A2P12110 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL6A2P12110 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.02□□□□□ -1.45
COL6A2P12110 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL6A2P12110 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL6A2P12110 TMSB4XP2-201ENST00000335179 210 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 RNU6-1339P-201ENST00000363574 91 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 RN7SKP128-201ENST00000364270 303 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL6A2P12110 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL6A2P12110 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL6A2P12110 MIR551B-201ENST00000384984 96 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL6A2P12110 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL6A2P12110 TAF9BP1-201ENST00000396646 746 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AL157702.1-201ENST00000398764 426 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC003045.1-201ENST00000398779 713 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL6A2P12110 RN7SKP17-201ENST00000411242 351 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.02□□□□□ -1.45
COL6A2P12110 ELOCP17-201ENST00000414751 326 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.02□□□□□ -1.45
COL6A2P12110 AC234781.4-201ENST00000419384 244 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 HMGB1P45-201ENST00000435986 653 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC128677.1-201ENST00000436016 442 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 MTND2P40-201ENST00000436718 841 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 HMGB1P16-201ENST00000447155 540 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 COX4I1P2-201ENST00000447446 547 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.02□□□□□ -1.45
COL6A2P12110 AL133351.3-201ENST00000454998 193 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.02□□□□□ -1.45
COL6A2P12110 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 AC147055.4-201ENST00000504399 745 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 SNORA70.11-201ENST00000515987 138 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 SNORA70.13-201ENST00000516116 138 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.02□□□□□ -1.45
COL6A2P12110 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL6A2P12110 AP002963.1-201ENST00000530590 184 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC005832.3-201ENST00000537929 631 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC007954.1-201ENST00000554198 494 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 NIFKP8-201ENST00000560500 874 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 LINC00556-201ENST00000569603 412 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 MIR4732-201ENST00000581873 76 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 MIR4801-201ENST00000582704 82 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.02□□□□□ -1.45
COL6A2P12110 SS18L2P2-201ENST00000583960 235 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 EIF1P6-201ENST00000600054 334 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC011453.2-201ENST00000603737 729 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 RBM11P1-201ENST00000604951 799 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC018714.1-201ENST00000605028 208 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.02□□□□□ -1.45
COL6A2P12110 AC068726.1-201ENST00000610993 341 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AC015540.1-201ENST00000615828 501 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 OR8G7P-201ENST00000616658 848 ntBASIC6.02□□□□□ -1.45
COL6A2P12110 AL356121.2-201ENST00000624715 780 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms