Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.69□□□□□ -1.5
TOP1P11387 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.69□□□□□ -1.5
TOP1P11387 AC010733.1-201ENST00000451515 401 ntBASIC5.69□□□□□ -1.5
TOP1P11387 AC016687.1-201ENST00000482574 353 ntBASIC5.69□□□□□ -1.5
TOP1P11387 Y_RNA.719-201ENST00000517156 106 ntBASIC5.69□□□□□ -1.5
TOP1P11387 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP1P11387 CDH12P4-201ENST00000517835 295 ntBASIC5.69□□□□□ -1.5
TOP1P11387 CDH12P3-201ENST00000517935 295 ntBASIC5.69□□□□□ -1.5
TOP1P11387 CDH12P1-201ENST00000518435 295 ntBASIC5.69□□□□□ -1.5
TOP1P11387 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.69□□□□□ -1.5
TOP1P11387 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP1P11387 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.69□□□□□ -1.5
TOP1P11387 AL049839.1-201ENST00000556151 657 ntBASIC5.69□□□□□ -1.5
TOP1P11387 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP1P11387 AC091042.1-201ENST00000579213 173 ntBASIC5.69□□□□□ -1.5
TOP1P11387 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TOP1P11387 AL161912.3-201ENST00000605404 628 ntBASIC5.69□□□□□ -1.5
TOP1P11387 AL158062.1-201ENST00000619632 745 ntBASIC5.69□□□□□ -1.5
TOP1P11387 AC073342.3-201ENST00000624211 193 ntBASIC5.69□□□□□ -1.5
TOP1P11387 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP1P11387 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP1P11387 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TOP1P11387 NCLP2-201ENST00000416078 1462 ntBASIC5.69□□□□□ -1.5
TOP1P11387 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP1P11387 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TOP1P11387 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
TOP1P11387 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP1P11387 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP1P11387 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
TOP1P11387 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
TOP1P11387 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP1P11387 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP1P11387 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP1P11387 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP1P11387 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP1P11387 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP1P11387 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TOP1P11387 AL672167.2-201ENST00000377164 879 ntBASIC5.68□□□□□ -1.5
TOP1P11387 U3.30-201ENST00000391308 210 ntBASIC5.68□□□□□ -1.5
TOP1P11387 RPL34P6-201ENST00000432390 345 ntBASIC5.68□□□□□ -1.5
TOP1P11387 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.68□□□□□ -1.5
TOP1P11387 RNA5SP103-201ENST00000459503 118 ntBASIC5.68□□□□□ -1.5
TOP1P11387 TRBV8-1-201ENST00000481590 279 ntBASIC5.68□□□□□ -1.5
TOP1P11387 OR9N1P-201ENST00000491296 333 ntBASIC5.68□□□□□ -1.5
TOP1P11387 AGGF1P3-201ENST00000493675 1213 ntBASIC5.68□□□□□ -1.5
TOP1P11387 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.68□□□□□ -1.5
TOP1P11387 RNA5SP303-201ENST00000516192 130 ntBASIC5.68□□□□□ -1.5
TOP1P11387 BUD31P1-201ENST00000521828 359 ntBASIC5.68□□□□□ -1.5
TOP1P11387 RPL23AP53-201ENST00000521854 457 ntBASIC5.68□□□□□ -1.5
TOP1P11387 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.68□□□□□ -1.5
TOP1P11387 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TOP1P11387 AP001880.2-201ENST00000538233 448 ntBASIC5.68□□□□□ -1.5
TOP1P11387 AC008147.3-201ENST00000548666 354 ntBASIC5.68□□□□□ -1.5
TOP1P11387 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.68□□□□□ -1.5
TOP1P11387 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.68□□□□□ -1.5
TOP1P11387 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP1P11387 AL122125.1-201ENST00000616999 600 ntBASIC5.68□□□□□ -1.5
TOP1P11387 AP003072.5-201ENST00000623872 773 ntBASIC5.68□□□□□ -1.5
TOP1P11387 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.68□□□□□ -1.5
TOP1P11387 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
TOP1P11387 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.68□□□□□ -1.5
TOP1P11387 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP1P11387 MAPK10-263ENST00000641052 4307 ntBASIC5.68□□□□□ -1.5
TOP1P11387 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.68□□□□□ -1.5
TOP1P11387 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TOP1P11387 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TOP1P11387 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP1P11387 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOP1P11387 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TOP1P11387 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TOP1P11387 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.67□□□□□ -1.5
TOP1P11387 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TOP1P11387 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TOP1P11387 RNVU1-6-201ENST00000364688 164 ntBASIC5.67□□□□□ -1.5
TOP1P11387 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TOP1P11387 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.67□□□□□ -1.5
TOP1P11387 OR2B7P-201ENST00000429302 934 ntBASIC5.67□□□□□ -1.5
TOP1P11387 NRBF2P3-201ENST00000432731 865 ntBASIC5.67□□□□□ -1.5
TOP1P11387 RPS5P7-201ENST00000456664 608 ntBASIC5.67□□□□□ -1.5
TOP1P11387 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.67□□□□□ -1.5
TOP1P11387 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TOP1P11387 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.67□□□□□ -1.5
TOP1P11387 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.67□□□□□ -1.5
TOP1P11387 SNORA74C-1-201ENST00000580726 201 ntBASIC5.67□□□□□ -1.5
TOP1P11387 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.67□□□□□ -1.5
TOP1P11387 AC022726.1-201ENST00000587475 207 ntBASIC5.67□□□□□ -1.5
TOP1P11387 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.67□□□□□ -1.5
TOP1P11387 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.67□□□□□ -1.5
TOP1P11387 AL713998.2-201ENST00000604538 1198 ntBASIC5.67□□□□□ -1.5
TOP1P11387 AL121932.1-201ENST00000605542 214 ntBASIC5.67□□□□□ -1.5
TOP1P11387 AP001642.1-201ENST00000624727 2117 ntBASIC5.67□□□□□ -1.5
TOP1P11387 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TOP1P11387 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.67□□□□□ -1.5
TOP1P11387 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TOP1P11387 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.67□□□□□ -1.5
TOP1P11387 SMG1P6-201ENST00000532337 2930 ntBASIC5.67□□□□□ -1.5
TOP1P11387 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOP1P11387 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TOP1P11387 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.66□□□□□ -1.5
TOP1P11387 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms