Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RNF40O75150 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC7.96□□□□□ -1.14
RNF40O75150 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RNF40O75150 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
RNF40O75150 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RNF40O75150 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.14
RNF40O75150 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
RNF40O75150 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RNF40O75150 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
RNF40O75150 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RNF40O75150 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF40O75150 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RNF40O75150 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
RNF40O75150 OR1S2-201ENST00000302592 978 ntBASIC7.95□□□□□ -1.14
RNF40O75150 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 AC073343.1-201ENST00000328239 651 ntBASIC7.95□□□□□ -1.14
RNF40O75150 Y_RNA.257-201ENST00000364596 102 ntBASIC7.95□□□□□ -1.14
RNF40O75150 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 MIR27A-201ENST00000385073 78 ntBASIC7.95□□□□□ -1.14
RNF40O75150 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 RNU4-14P-201ENST00000410858 122 ntBASIC7.95□□□□□ -1.14
RNF40O75150 VDAC2P3-201ENST00000430995 828 ntBASIC7.95□□□□□ -1.14
RNF40O75150 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 AC023347.2-201ENST00000433994 462 ntBASIC7.95□□□□□ -1.14
RNF40O75150 AL627308.1-201ENST00000435693 821 ntBASIC7.95□□□□□ -1.14
RNF40O75150 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
RNF40O75150 AC239800.1-201ENST00000442049 719 ntBASIC7.95□□□□□ -1.14
RNF40O75150 PPP1R2P5-201ENST00000457256 603 ntBASIC7.95□□□□□ -1.14
RNF40O75150 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.95□□□□□ -1.14
RNF40O75150 AC025164.1-201ENST00000496249 478 ntBASIC7.95□□□□□ -1.14
RNF40O75150 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF40O75150 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC7.95□□□□□ -1.14
RNF40O75150 BTG4P1-201ENST00000510421 183 ntBASIC7.95□□□□□ -1.14
RNF40O75150 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF40O75150 RNU6-885P-201ENST00000516607 104 ntBASIC7.95□□□□□ -1.14
RNF40O75150 AP005597.2-201ENST00000526238 341 ntBASIC7.95□□□□□ -1.14
RNF40O75150 GTF2IP11-201ENST00000526931 420 ntBASIC7.95□□□□□ -1.14
RNF40O75150 AP003181.2-201ENST00000528941 181 ntBASIC7.95□□□□□ -1.14
RNF40O75150 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF40O75150 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.95□□□□□ -1.14
RNF40O75150 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 NMNAT1P1-201ENST00000554095 876 ntBASIC7.95□□□□□ -1.14
RNF40O75150 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.95□□□□□ -1.14
RNF40O75150 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC7.95□□□□□ -1.14
RNF40O75150 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.95□□□□□ -1.14
RNF40O75150 AP001180.3-201ENST00000582221 145 ntBASIC7.95□□□□□ -1.14
RNF40O75150 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
RNF40O75150 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.95□□□□□ -1.14
RNF40O75150 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF40O75150 AC068802.1-201ENST00000603420 732 ntBASIC7.95□□□□□ -1.14
RNF40O75150 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 AC005014.2-201ENST00000607795 599 ntBASIC7.95□□□□□ -1.14
RNF40O75150 AC135050.6-202ENST00000613584 392 ntBASIC7.95□□□□□ -1.14
RNF40O75150 FAM27E3-202ENST00000614611 340 ntBASIC7.95□□□□□ -1.14
RNF40O75150 MIR6774-201ENST00000614651 70 ntBASIC7.95□□□□□ -1.14
RNF40O75150 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.95□□□□□ -1.14
RNF40O75150 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RNF40O75150 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
RNF40O75150 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 AL451064.2-201ENST00000623514 1654 ntBASIC7.95□□□□□ -1.14
RNF40O75150 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
RNF40O75150 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.95□□□□□ -1.14
RNF40O75150 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
RNF40O75150 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 OR7E11P-202ENST00000642027 1491 ntBASIC7.94□□□□□ -1.14
RNF40O75150 LPAL2-203ENST00000454031 2498 ntBASIC7.94□□□□□ -1.14
RNF40O75150 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.94□□□□□ -1.14
RNF40O75150 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.94□□□□□ -1.14
RNF40O75150 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 MAPK10-383ENST00000642032 3390 ntBASIC7.94□□□□□ -1.14
RNF40O75150 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.94□□□□□ -1.14
RNF40O75150 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF40O75150 AL157777.2-201ENST00000258070 137 ntBASIC7.94□□□□□ -1.14
RNF40O75150 RNU6-769P-201ENST00000384407 104 ntBASIC7.94□□□□□ -1.14
RNF40O75150 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.94□□□□□ -1.14
RNF40O75150 AL450992.3-201ENST00000413192 568 ntBASIC7.94□□□□□ -1.14
RNF40O75150 RPL34P19-201ENST00000415903 342 ntBASIC7.94□□□□□ -1.14
RNF40O75150 RPSAP1-201ENST00000421328 880 ntBASIC7.94□□□□□ -1.14
RNF40O75150 AC008753.1-201ENST00000423096 284 ntBASIC7.94□□□□□ -1.14
RNF40O75150 HSPE1P16-201ENST00000426640 348 ntBASIC7.94□□□□□ -1.14
RNF40O75150 DPY19L1P2-201ENST00000426647 915 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms