Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
PRKNO60260 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.77□□□□□ -1.65
PRKNO60260 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.77□□□□□ -1.65
PRKNO60260 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.77□□□□□ -1.65
PRKNO60260 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRKNO60260 AC006210.2-201ENST00000367074 1545 ntBASIC4.77□□□□□ -1.65
PRKNO60260 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.76□□□□□ -1.65
PRKNO60260 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.76□□□□□ -1.65
PRKNO60260 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
PRKNO60260 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.76□□□□□ -1.65
PRKNO60260 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PRKNO60260 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 RNA5SP305-201ENST00000362665 119 ntBASIC4.76□□□□□ -1.65
PRKNO60260 RNA5SP223-201ENST00000365174 120 ntBASIC4.76□□□□□ -1.65
PRKNO60260 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 MIR122-201ENST00000385044 85 ntBASIC4.76□□□□□ -1.65
PRKNO60260 SNORD65-201ENST00000391079 73 ntBASIC4.76□□□□□ -1.65
PRKNO60260 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.76□□□□□ -1.65
PRKNO60260 PEX12P1-201ENST00000400284 1048 ntBASIC4.76□□□□□ -1.65
PRKNO60260 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.76□□□□□ -1.65
PRKNO60260 HSPD1P12-201ENST00000429127 1069 ntBASIC4.76□□□□□ -1.65
PRKNO60260 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.76□□□□□ -1.65
PRKNO60260 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.76□□□□□ -1.65
PRKNO60260 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.76□□□□□ -1.65
PRKNO60260 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.76□□□□□ -1.65
PRKNO60260 RNFT1P2-201ENST00000443064 757 ntBASIC4.76□□□□□ -1.65
PRKNO60260 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 AL606517.1-201ENST00000446914 387 ntBASIC4.76□□□□□ -1.65
PRKNO60260 NPM1P29-201ENST00000483112 803 ntBASIC4.76□□□□□ -1.65
PRKNO60260 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.76□□□□□ -1.65
PRKNO60260 HAUS1P1-201ENST00000505275 832 ntBASIC4.76□□□□□ -1.65
PRKNO60260 AC097173.1-201ENST00000505862 819 ntBASIC4.76□□□□□ -1.65
PRKNO60260 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 SNORA70.11-201ENST00000515987 138 ntBASIC4.76□□□□□ -1.65
PRKNO60260 SNORA70.13-201ENST00000516116 138 ntBASIC4.76□□□□□ -1.65
PRKNO60260 RN7SKP147-201ENST00000517154 244 ntBASIC4.76□□□□□ -1.65
PRKNO60260 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.76□□□□□ -1.65
PRKNO60260 MTCO1P4-201ENST00000520516 1409 ntBASIC4.76□□□□□ -1.65
PRKNO60260 AC013701.1-201ENST00000522657 465 ntBASIC4.76□□□□□ -1.65
PRKNO60260 AC104115.2-201ENST00000523026 687 ntBASIC4.76□□□□□ -1.65
PRKNO60260 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.76□□□□□ -1.65
PRKNO60260 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.76□□□□□ -1.65
PRKNO60260 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.76□□□□□ -1.65
PRKNO60260 GLRXP2-201ENST00000555594 321 ntBASIC4.76□□□□□ -1.65
PRKNO60260 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.76□□□□□ -1.65
PRKNO60260 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.76□□□□□ -1.65
PRKNO60260 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.76□□□□□ -1.65
PRKNO60260 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.76□□□□□ -1.65
PRKNO60260 AC034236.3-201ENST00000605999 461 ntBASIC4.76□□□□□ -1.65
PRKNO60260 AC133644.2-201ENST00000608142 540 ntBASIC4.76□□□□□ -1.65
PRKNO60260 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 AC068870.2-201ENST00000620635 389 ntBASIC4.76□□□□□ -1.65
PRKNO60260 AP002799.1-201ENST00000623552 423 ntBASIC4.76□□□□□ -1.65
PRKNO60260 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.76□□□□□ -1.65
PRKNO60260 OR4G3P-201ENST00000633500 913 ntBASIC4.76□□□□□ -1.65
PRKNO60260 TMEM30CP-203ENST00000637814 1035 ntBASIC4.76□□□□□ -1.65
PRKNO60260 CASC19-281ENST00000642118 1554 ntBASIC4.76□□□□□ -1.65
PRKNO60260 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.76□□□□□ -1.65
PRKNO60260 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.76□□□□□ -1.65
PRKNO60260 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
PRKNO60260 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRKNO60260 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
PRKNO60260 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PRKNO60260 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.75□□□□□ -1.65
PRKNO60260 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PRKNO60260 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 MIR16-2-201ENST00000362117 81 ntBASIC4.75□□□□□ -1.65
PRKNO60260 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.75□□□□□ -1.65
PRKNO60260 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 RPL10P10-201ENST00000403509 664 ntBASIC4.75□□□□□ -1.65
PRKNO60260 RNU4-27P-201ENST00000410889 139 ntBASIC4.75□□□□□ -1.65
PRKNO60260 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRKNO60260 RPS27AP6-201ENST00000427962 448 ntBASIC4.75□□□□□ -1.65
PRKNO60260 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.75□□□□□ -1.65
PRKNO60260 RBMY2QP-201ENST00000429799 1147 ntBASIC4.75□□□□□ -1.65
PRKNO60260 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.75□□□□□ -1.65
PRKNO60260 AC092647.3-201ENST00000443044 633 ntBASIC4.75□□□□□ -1.65
PRKNO60260 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.75□□□□□ -1.65
PRKNO60260 OTX2P1-201ENST00000450956 354 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms