Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PROM1O43490 AC239868.2-201ENST00000564237 4527 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AC132825.1-201ENST00000463573 2247 ntBASIC5.51□□□□□ -1.53
PROM1O43490 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.51□□□□□ -1.53
PROM1O43490 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.51□□□□□ -1.53
PROM1O43490 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PROM1O43490 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PROM1O43490 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PROM1O43490 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PROM1O43490 AC008549.2-201ENST00000333482 706 ntBASIC5.51□□□□□ -1.53
PROM1O43490 TMSB4XP2-201ENST00000335179 210 ntBASIC5.51□□□□□ -1.53
PROM1O43490 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.51□□□□□ -1.53
PROM1O43490 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.51□□□□□ -1.53
PROM1O43490 Y_RNA.436-201ENST00000384097 102 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AC233289.1-201ENST00000403700 508 ntBASIC5.51□□□□□ -1.53
PROM1O43490 RNA5SP178-201ENST00000410380 128 ntBASIC5.51□□□□□ -1.53
PROM1O43490 RN7SKP29-201ENST00000410957 272 ntBASIC5.51□□□□□ -1.53
PROM1O43490 Z93019.1-201ENST00000416450 973 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.51□□□□□ -1.53
PROM1O43490 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.51□□□□□ -1.53
PROM1O43490 RPS4XP16-201ENST00000427198 791 ntBASIC5.51□□□□□ -1.53
PROM1O43490 CRIP1P1-201ENST00000427567 185 ntBASIC5.51□□□□□ -1.53
PROM1O43490 MTND6P12-201ENST00000428247 522 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.51□□□□□ -1.53
PROM1O43490 MTCO3P5-201ENST00000433620 714 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AL008629.1-201ENST00000438615 184 ntBASIC5.51□□□□□ -1.53
PROM1O43490 PTGES3P1-201ENST00000439531 483 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AC015983.1-201ENST00000441577 373 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.51□□□□□ -1.53
PROM1O43490 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.51□□□□□ -1.53
PROM1O43490 MTCO2P7-201ENST00000446518 666 ntBASIC5.51□□□□□ -1.53
PROM1O43490 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.51□□□□□ -1.53
PROM1O43490 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.51□□□□□ -1.53
PROM1O43490 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.51□□□□□ -1.53
PROM1O43490 MTND2P14-201ENST00000482139 351 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AC023050.1-201ENST00000498198 304 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.51□□□□□ -1.53
PROM1O43490 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.51□□□□□ -1.53
PROM1O43490 RNA5SP271-201ENST00000516700 88 ntBASIC5.51□□□□□ -1.53
PROM1O43490 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.51□□□□□ -1.53
PROM1O43490 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.51□□□□□ -1.53
PROM1O43490 MTND2P26-201ENST00000528255 1029 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AP000648.1-201ENST00000529682 397 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AC090022.1-201ENST00000546569 311 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.51□□□□□ -1.53
PROM1O43490 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.51□□□□□ -1.53
PROM1O43490 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.51□□□□□ -1.53
PROM1O43490 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.51□□□□□ -1.53
PROM1O43490 NBR2-204ENST00000587322 63 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.51□□□□□ -1.53
PROM1O43490 MTND3P19-201ENST00000603825 345 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AL031601.1-201ENST00000605702 394 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AL133481.2-203ENST00000607558 139 ntBASIC5.51□□□□□ -1.53
PROM1O43490 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.51□□□□□ -1.53
PROM1O43490 AC024257.5-201ENST00000612739 531 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AL121895.2-201ENST00000619558 447 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.51□□□□□ -1.53
PROM1O43490 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.51□□□□□ -1.53
PROM1O43490 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PROM1O43490 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PROM1O43490 PDZK1P1-202ENST00000425209 1350 ntBASIC5.51□□□□□ -1.53
PROM1O43490 MTND4P10-201ENST00000446199 1363 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AL353796.1-201ENST00000561542 3241 ntBASIC5.51□□□□□ -1.53
PROM1O43490 MFSD8-239ENST00000641590 2479 ntBASIC5.51□□□□□ -1.53
PROM1O43490 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.51□□□□□ -1.53
PROM1O43490 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.51□□□□□ -1.53
PROM1O43490 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PROM1O43490 MFSD8-219ENST00000641228 2559 ntBASIC5.51□□□□□ -1.53
PROM1O43490 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PROM1O43490 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PROM1O43490 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.51□□□□□ -1.53
PROM1O43490 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PROM1O43490 ZNF849P-201ENST00000594711 1566 ntBASIC5.5□□□□□ -1.53
PROM1O43490 AC117409.1-201ENST00000470499 1310 ntBASIC5.5□□□□□ -1.53
PROM1O43490 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.5□□□□□ -1.53
PROM1O43490 AL133268.1-201ENST00000405676 1401 ntBASIC5.5□□□□□ -1.53
PROM1O43490 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PROM1O43490 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 TMSB4XP4-201ENST00000323496 618 ntBASIC5.5□□□□□ -1.53
PROM1O43490 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.5□□□□□ -1.53
PROM1O43490 RNU4-92P-201ENST00000363783 136 ntBASIC5.5□□□□□ -1.53
PROM1O43490 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PROM1O43490 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 AC002524.1-201ENST00000411687 547 ntBASIC5.5□□□□□ -1.53
PROM1O43490 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.5□□□□□ -1.53
PROM1O43490 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.5□□□□□ -1.53
PROM1O43490 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.5□□□□□ -1.53
PROM1O43490 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.5□□□□□ -1.53
PROM1O43490 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.5□□□□□ -1.53
PROM1O43490 OTX2P1-201ENST00000450956 354 ntBASIC5.5□□□□□ -1.53
PROM1O43490 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PROM1O43490 AC004129.2-201ENST00000457229 287 ntBASIC5.5□□□□□ -1.53
PROM1O43490 MTND2P28-201ENST00000457540 1044 ntBASIC5.5□□□□□ -1.53
PROM1O43490 AC004815.1-201ENST00000484185 331 ntBASIC5.5□□□□□ -1.53
PROM1O43490 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.5□□□□□ -1.53
PROM1O43490 MRPS33P3-201ENST00000513456 322 ntBASIC5.5□□□□□ -1.53
PROM1O43490 RNA5SP303-201ENST00000516192 130 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms