Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC073052.1-201ENST00000440417 714 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC28A1O00337 NPM1P39-201ENST00000449818 867 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AL513343.1-201ENST00000451818 792 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 RPS17P2-201ENST00000461663 408 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 RN7SL517P-201ENST00000462240 305 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC28A1O00337 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 NPM1P29-201ENST00000483112 803 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 RPS21P4-201ENST00000487122 248 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC28A1O00337 RN7SL346P-201ENST00000491561 294 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC010350.1-201ENST00000504908 231 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC011411.1-201ENST00000509592 876 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC28A1O00337 RNA5SP362-201ENST00000516048 118 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 RN7SKP260-201ENST00000516907 149 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 RNU6-889P-201ENST00000517189 103 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC28A1O00337 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC28A1O00337 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.81□□□□□ -1.64
SLC28A1O00337 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC28A1O00337 OR4A46P-201ENST00000527255 933 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC28A1O00337 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.81□□□□□ -1.64
SLC28A1O00337 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC28A1O00337 CYCSP40-201ENST00000575927 294 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC28A1O00337 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 AC087783.2-201ENST00000605070 562 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.81□□□□□ -1.64
SLC28A1O00337 AC135803.1-201ENST00000608748 565 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC28A1O00337 MIR8069-1-201ENST00000616627 86 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AL122125.1-201ENST00000616999 600 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AL162233.1-201ENST00000620014 944 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 MIR8069-2-201ENST00000621412 86 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 AC099494.2-201ENST00000623371 978 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC28A1O00337 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC28A1O00337 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SLC28A1O00337 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SLC28A1O00337 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC28A1O00337 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC28A1O00337 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC28A1O00337 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC28A1O00337 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC28A1O00337 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC28A1O00337 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC28A1O00337 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC28A1O00337 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SLC28A1O00337 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC28A1O00337 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SLC28A1O00337 SNORA70.10-201ENST00000384515 134 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 RN7SKP126-201ENST00000411143 300 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 OR13Z1P-201ENST00000416141 834 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 RPL36AP10-201ENST00000421785 322 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AL121776.1-201ENST00000429337 372 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC079807.1-201ENST00000429993 481 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC28A1O00337 NPM1P33-201ENST00000438918 872 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC28A1O00337 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC28A1O00337 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.8□□□□□ -1.64
SLC28A1O00337 KNOP1P3-201ENST00000446933 426 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AL157827.1-201ENST00000447622 132 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC28A1O00337 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AL591473.1-201ENST00000464297 313 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC096741.1-201ENST00000472250 846 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC025181.1-201ENST00000477507 416 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC090686.1-201ENST00000481577 749 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC28A1O00337 AC093770.1-201ENST00000511559 571 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC138938.1-201ENST00000515431 782 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 RN7SKP46-201ENST00000515942 234 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC28A1O00337 OR10D4P-201ENST00000525892 951 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 NPM1P35-201ENST00000533043 868 ntBASIC4.8□□□□□ -1.64
SLC28A1O00337 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms