Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
PTCH2Q9Y6C5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PTCH2Q9Y6C5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
PTCH2Q9Y6C5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 KRT16P6-202ENST00000425692 1426 ntBASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 AL022342.1-201ENST00000400363 863 ntBASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PTCH2Q9Y6C5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.06■■□□□ 1.12
PTCH2Q9Y6C5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PTCH2Q9Y6C5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 AC005229.4-201ENST00000610085 2198 ntBASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 Z98882.1-201ENST00000622160 2253 ntBASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PTCH2Q9Y6C5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms