Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB11Q9Y5F2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 AP001271.2-201ENST00000624018 1556 ntBASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 AC018553.1-201ENST00000616682 1458 ntBASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 AL355075.4-201ENST00000554988 638 ntBASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB11Q9Y5F2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 AL353807.1-201ENST00000427475 662 ntBASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 AC026471.5-201ENST00000615068 467 ntBASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 AC097493.4-201ENST00000641197 219 ntBASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB11Q9Y5F2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB11Q9Y5F2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 KRT16P5-201ENST00000455284 522 ntBASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB11Q9Y5F2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms