Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.4■□□□□ 0.86
YIPF1Q9Y548 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
YIPF1Q9Y548 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
YIPF1Q9Y548 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
YIPF1Q9Y548 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 LIN28AP1-201ENST00000429574 405 ntBASIC20.39■□□□□ 0.85
YIPF1Q9Y548 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 ATP5G1P1-201ENST00000448724 379 ntBASIC20.39■□□□□ 0.85
YIPF1Q9Y548 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.39■□□□□ 0.85
YIPF1Q9Y548 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
YIPF1Q9Y548 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.37■□□□□ 0.85
YIPF1Q9Y548 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 AC116562.4-202ENST00000641738 218 ntBASIC20.37■□□□□ 0.85
YIPF1Q9Y548 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF1Q9Y548 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 ARMC10P1-201ENST00000313754 855 ntBASIC20.36■□□□□ 0.85
YIPF1Q9Y548 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 AC104076.2-201ENST00000448912 469 ntBASIC20.36■□□□□ 0.85
YIPF1Q9Y548 DUX4L26-201ENST00000489078 1255 ntBASIC20.36■□□□□ 0.85
YIPF1Q9Y548 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 AC006011.2-201ENST00000621313 1158 ntBASIC20.36■□□□□ 0.85
YIPF1Q9Y548 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF1Q9Y548 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.35■□□□□ 0.85
YIPF1Q9Y548 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
YIPF1Q9Y548 AC099778.1-201ENST00000568593 1911 ntBASIC20.35■□□□□ 0.85
YIPF1Q9Y548 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms